Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RPS26P3-201ENST00000470205 348 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AC010285.1-201ENST00000470580 392 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 RPS26P28-201ENST00000470806 348 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AC090543.2-201ENST00000483963 348 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AC004057.1-201ENST00000485827 348 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AC110792.1-201ENST00000491826 472 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 RN7SL691P-201ENST00000494487 301 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 RN7SKP122-201ENST00000515923 296 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 RNA5SP73-201ENST00000516744 108 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 RNU6-914P-201ENST00000516749 109 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 Y_RNA.711-201ENST00000516993 102 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 RNU6-1213P-201ENST00000517075 94 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 RANP9-201ENST00000519957 271 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AC006064.5-201ENST00000541782 248 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 ARF4P1-201ENST00000605447 541 ntBASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KCMF1Q9P0J7 AL158163.1-201ENST00000603915 1649 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 RNU1-15P-201ENST00000353977 144 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 RNA5SP502-201ENST00000362694 119 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 RNU1-132P-201ENST00000364300 164 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 SNORA70.2-201ENST00000364506 135 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 RNU6-335P-201ENST00000364563 113 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 RNU6-1303P-201ENST00000364841 107 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 TOMM22P1-201ENST00000418578 312 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 RPL23AP69-201ENST00000431134 458 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 RPL23AP81-201ENST00000455252 467 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 MTCO3P10-201ENST00000455912 772 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 RPL21P41-201ENST00000459863 264 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 RPL37P6-201ENST00000460682 294 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 AC010618.1-201ENST00000469924 477 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 AL163540.1-201ENST00000485382 386 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 AC104164.2-201ENST00000496953 495 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 VWA8P1-201ENST00000510889 176 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 IGKV2D-23-201ENST00000518179 286 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 MIR3939-201ENST00000582614 106 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 SNRPGP15-201ENST00000600149 222 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 MIR6128-201ENST00000615528 109 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 AC010378.1-201ENST00000619270 362 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 AC007823.1-201ENST00000569932 1566 ntBASIC4.06□□□□□ -1.76
KCMF1Q9P0J7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 ZNF285B-201ENST00000561698 1767 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 OR4G2P-202ENST00000641004 1759 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 Y_RNA.197-201ENST00000364004 102 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 RNU6-738P-201ENST00000384531 106 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 RNU6-308P-201ENST00000390957 107 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 RNU6-954P-201ENST00000411355 107 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 RPL21P90-201ENST00000415692 466 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 RPL31P12-201ENST00000422587 358 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 RBMY1KP-201ENST00000423480 476 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 AL590632.1-201ENST00000424289 371 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 ATP5HP2-201ENST00000433885 485 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 RPL7P28-201ENST00000437739 740 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 HSFY6P-201ENST00000445573 403 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 AC008264.1-201ENST00000447612 367 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 HMGB3P22-202ENST00000451823 572 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 AL645939.1-201ENST00000453429 797 ntBASIC4.05□□□□□ -1.76
KCMF1Q9P0J7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms