Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 RNU6-343P-201ENST00000364709 104 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 Y_RNA.311-201ENST00000365068 96 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 RNU6-253P-201ENST00000384730 105 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 RNU6-952P-201ENST00000391164 108 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 MTCYBP45-201ENST00000435243 565 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 UBE2V1P13-201ENST00000436983 439 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 AL714022.1-201ENST00000439897 151 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 MTCYBP3-201ENST00000445588 1137 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 USP9YP10-201ENST00000454868 628 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 AC116337.2-201ENST00000477662 156 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 AC090096.1-201ENST00000489168 390 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 SNORA31.11-201ENST00000516528 139 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 RNU6-1282P-201ENST00000516735 96 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 RNU6-928P-201ENST00000516876 104 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 MIR5694-201ENST00000581190 76 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 AC061975.8-201ENST00000587058 721 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 AC098826.3-201ENST00000603823 466 ntBASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC10Q9NYD6 AC011477.1-204ENST00000623416 1325 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 OR56A5-201ENST00000340110 738 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 RNU4-68P-201ENST00000364314 141 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 RN7SKP226-201ENST00000364912 300 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AL162578.1-201ENST00000406202 378 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 RNU4-26P-201ENST00000410270 107 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AL513331.1-201ENST00000411908 397 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 CCDC58P2-201ENST00000417131 366 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AL953862.1-201ENST00000423016 168 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AL354692.1-201ENST00000423044 315 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 RPL26P6-201ENST00000440913 438 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 DPPA3P1-201ENST00000448050 469 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AC109445.1-201ENST00000512356 383 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 CYCSP2-201ENST00000558168 301 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AC009127.3-201ENST00000570531 403 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 MIR4509-3-201ENST00000578671 94 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 OR4K8P-201ENST00000578842 1048 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 MIR4509-2-201ENST00000583920 94 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 RPS15AP11-201ENST00000594193 385 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AL136370.1-201ENST00000608166 691 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AC245884.12-201ENST00000615364 59 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 HMGB1P24-202ENST00000615653 685 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 MIR4509-1-201ENST00000618224 94 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AC006386.1-201ENST00000619436 415 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 MIR6873-201ENST00000622788 63 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AC090772.4-201ENST00000623599 362 ntBASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC10Q9NYD6 Z82195.2-201ENST00000612348 18351 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 SNORD116.1-201ENST00000365628 92 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 U3.20-201ENST00000390909 217 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 AF274854.1-201ENST00000413236 615 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 AC106883.1-201ENST00000418805 562 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 AC007560.1-201ENST00000426912 237 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 MTND1P9-201ENST00000453775 944 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 AC092155.2-201ENST00000454675 477 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 RPL9P6-201ENST00000492764 598 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 AC109464.2-201ENST00000510242 943 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 RNY4P37-201ENST00000516225 96 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 SCARNA1-201ENST00000517138 166 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 MTCYBP23-201ENST00000558717 1102 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 AC022662.1-201ENST00000580252 331 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 MIR4524B-201ENST00000581569 115 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 AL136981.2-201ENST00000617319 734 ntBASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXC10Q9NYD6 AC022336.2-201ENST00000568966 2538 ntBASIC2.66□□□□□ -1.98
HOXC10Q9NYD6 AP006437.1-201ENST00000641440 3685 ntBASIC2.66□□□□□ -1.98
HOXC10Q9NYD6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HOXC10Q9NYD6 Y_RNA.192-201ENST00000363977 102 ntBASIC2.66□□□□□ -1.98
HOXC10Q9NYD6 Y_RNA.234-201ENST00000364409 97 ntBASIC2.66□□□□□ -1.98
HOXC10Q9NYD6 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXC10Q9NYD6 RPL23AP29-201ENST00000397284 453 ntBASIC2.66□□□□□ -1.98
HOXC10Q9NYD6 RNU4-72P-201ENST00000410754 173 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms