Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC010099.1-201ENST00000455434 375 ntBASIC6.75□□□□□ -1.33
RTN4Q9NQC3 RN7SL413P-201ENST00000482700 297 ntBASIC6.75□□□□□ -1.33
RTN4Q9NQC3 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 AL359198.2-201ENST00000611836 194 ntBASIC6.75□□□□□ -1.33
RTN4Q9NQC3 AC100827.5-201ENST00000615883 426 ntBASIC6.75□□□□□ -1.33
RTN4Q9NQC3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 RBBP8P1-201ENST00000449447 1844 ntBASIC6.75□□□□□ -1.33
RTN4Q9NQC3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RTN4Q9NQC3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.74□□□□□ -1.33
RTN4Q9NQC3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RTN4Q9NQC3 Y_RNA.14-201ENST00000362415 103 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 RNU6-879P-201ENST00000364328 108 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 Y_RNA.483-201ENST00000384380 101 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 MT-TW-201ENST00000387382 68 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 SNORA26.3-201ENST00000391119 136 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 MIR548H3-201ENST00000408771 118 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 RPS26P42-201ENST00000413485 326 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 AC139712.2-201ENST00000424302 339 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 AL358075.3-201ENST00000426289 226 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 AC099677.3-201ENST00000427081 395 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 EIF1P2-201ENST00000428233 350 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 RPS10P14-201ENST00000440748 502 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 AC245291.3-201ENST00000443400 292 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 AC124945.1-201ENST00000485133 188 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 AKIRIN2P1-201ENST00000505898 352 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 AC020593.1-201ENST00000507399 299 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 IGKV2-23-201ENST00000518729 323 ntBASIC6.74□□□□□ -1.33
RTN4Q9NQC3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC6.74□□□□□ -1.33
RTN4Q9NQC3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC6.74□□□□□ -1.33
RTN4Q9NQC3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.74□□□□□ -1.33
RTN4Q9NQC3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC6.74□□□□□ -1.33
RTN4Q9NQC3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC6.74□□□□□ -1.33
RTN4Q9NQC3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.74□□□□□ -1.33
RTN4Q9NQC3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
RTN4Q9NQC3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTN4Q9NQC3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
RTN4Q9NQC3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 SNORD81.1-201ENST00000363064 77 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 RN7SKP103-201ENST00000363848 320 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 SNORD115-8-201ENST00000363856 82 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 SNORD115-38-201ENST00000365037 82 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 RN7SKP205-201ENST00000410999 307 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 RNU6-130P-201ENST00000411112 103 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 CYCSP48-201ENST00000417124 323 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 PNKDP1-201ENST00000435914 430 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 PA2G4P1-201ENST00000442248 1197 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 ENPP7P11-201ENST00000505915 627 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 AC090958.1-201ENST00000511122 351 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 RNU6-1023P-201ENST00000516137 106 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 MIR3136-201ENST00000583498 78 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 AC024220.1-201ENST00000603675 484 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 AC023043.4-201ENST00000612081 449 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 AC240442.1-201ENST00000616055 283 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 AF127577.6-201ENST00000623352 2191 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 AL450345.1-202ENST00000605741 3881 ntBASIC6.73□□□□□ -1.33
RTN4Q9NQC3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RTN4Q9NQC3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RTN4Q9NQC3 RNU6-280P-201ENST00000364145 104 ntBASIC6.72□□□□□ -1.33
RTN4Q9NQC3 SNORD115-46-201ENST00000390982 71 ntBASIC6.72□□□□□ -1.33
RTN4Q9NQC3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
RTN4Q9NQC3 Z98949.2-201ENST00000440996 144 ntBASIC6.72□□□□□ -1.33
RTN4Q9NQC3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RTN4Q9NQC3 AC097359.1-201ENST00000447946 463 ntBASIC6.72□□□□□ -1.33
RTN4Q9NQC3 AL389915.2-201ENST00000454576 441 ntBASIC6.72□□□□□ -1.33
RTN4Q9NQC3 AP000870.1-201ENST00000472927 406 ntBASIC6.72□□□□□ -1.33
RTN4Q9NQC3 KHDC1P1-201ENST00000511053 508 ntBASIC6.72□□□□□ -1.33
RTN4Q9NQC3 RNU6-388P-201ENST00000517012 105 ntBASIC6.72□□□□□ -1.33
RTN4Q9NQC3 RNU6-389P-201ENST00000517048 105 ntBASIC6.72□□□□□ -1.33
RTN4Q9NQC3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC6.72□□□□□ -1.33
RTN4Q9NQC3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RTN4Q9NQC3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.72□□□□□ -1.33
RTN4Q9NQC3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.72□□□□□ -1.33
RTN4Q9NQC3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms