Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MIR5701-2-201ENST00000615634 82 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSU72Q9NP77 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSU72Q9NP77 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SSU72Q9NP77 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSU72Q9NP77 MAPK10-304ENST00000641341 3984 ntBASIC4.62□□□□□ -1.67
SSU72Q9NP77 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.62□□□□□ -1.67
SSU72Q9NP77 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSU72Q9NP77 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSU72Q9NP77 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSU72Q9NP77 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.61□□□□□ -1.67
SSU72Q9NP77 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSU72Q9NP77 AC125257.1-201ENST00000560400 2930 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSU72Q9NP77 LINC01109-201ENST00000603837 3081 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSU72Q9NP77 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSU72Q9NP77 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SSU72Q9NP77 SNORA51.11-201ENST00000384442 131 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SSU72Q9NP77 OR3A2-201ENST00000408891 1076 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 RNU6-130P-201ENST00000411112 103 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.61□□□□□ -1.67
SSU72Q9NP77 AL592045.1-201ENST00000429867 352 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 RPL23AP25-201ENST00000430973 463 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 AL359073.1-201ENST00000448036 403 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 RPS5P7-201ENST00000456664 608 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 RPS4XP1-201ENST00000482189 787 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 ACA59.1-201ENST00000515966 143 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 RNA5SP154-201ENST00000516193 111 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 RNU6-570P-201ENST00000517051 105 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 RNU6-840P-201ENST00000517275 65 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.61□□□□□ -1.67
SSU72Q9NP77 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSU72Q9NP77 AC133555.2-201ENST00000550213 292 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.61□□□□□ -1.67
SSU72Q9NP77 AC013244.1-201ENST00000604279 193 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 AL121917.1-203ENST00000605534 577 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 RMST_4.1-201ENST00000616886 107 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.61□□□□□ -1.67
SSU72Q9NP77 LINC01355-201ENST00000566551 5444 ntBASIC4.61□□□□□ -1.67
SSU72Q9NP77 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSU72Q9NP77 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SSU72Q9NP77 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSU72Q9NP77 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSU72Q9NP77 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSU72Q9NP77 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSU72Q9NP77 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSU72Q9NP77 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSU72Q9NP77 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 MIR448-201ENST00000362131 111 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 RNU6-200P-201ENST00000364743 107 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 RNU6-708P-201ENST00000384217 107 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 SNORA51.8-201ENST00000384234 132 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 Y_RNA.515-201ENST00000384535 112 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 RNU6-178P-201ENST00000384631 104 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 MIR93-201ENST00000385024 80 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSU72Q9NP77 RAC1P3-201ENST00000416129 580 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 RPL21P38-201ENST00000418090 167 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 MTATP6P4-201ENST00000427725 675 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 CFL1P1-202ENST00000432948 411 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 HSPD1P21-201ENST00000436541 245 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSU72Q9NP77 CEACAMP6-201ENST00000452007 574 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSU72Q9NP77 ISCUP1-201ENST00000454451 448 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 OR2AO1P-201ENST00000476497 403 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 AC091868.1-201ENST00000508746 304 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 RNA5SP471-201ENST00000516971 106 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 AP003733.2-201ENST00000529409 171 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 AC008521.2-201ENST00000591021 259 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 AC098479.1-201ENST00000609225 154 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 AL138721.1-201ENST00000616756 179 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 AC130454.1-201ENST00000622948 401 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 FP236240.3-201ENST00000623061 327 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 AL512643.1-201ENST00000635735 524 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 Z99571.1-201ENST00000636677 394 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 AC009812.4-201ENST00000569134 1805 ntBASIC4.6□□□□□ -1.67
SSU72Q9NP77 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.6□□□□□ -1.67
SSU72Q9NP77 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SSU72Q9NP77 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.59□□□□□ -1.67
SSU72Q9NP77 UBE2L2-201ENST00000254302 429 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms