Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 AC104136.1-201ENST00000512969 394 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 RNU6-566P-201ENST00000516790 107 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 AC128657.1-201ENST00000549459 145 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 LSM6P2-201ENST00000552208 177 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 MIR4424-201ENST00000585257 86 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 AC006130.2-201ENST00000586202 326 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 IGHV3-29-201ENST00000604817 344 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 AL157817.1-201ENST00000614264 790 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.37□□□□□ -1.71
CD248Q9HCU0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CD248Q9HCU0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CD248Q9HCU0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CD248Q9HCU0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CD248Q9HCU0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CD248Q9HCU0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD248Q9HCU0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD248Q9HCU0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CD248Q9HCU0 ZNF807-201ENST00000328088 1707 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD248Q9HCU0 HSPE1P11-201ENST00000339579 310 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 Y_RNA.22-201ENST00000362492 102 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 RNU1-63P-201ENST00000383902 164 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 AL138878.1-201ENST00000405131 347 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 RNU2-29P-201ENST00000410423 189 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 HMGB3P2-201ENST00000411913 584 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 MCFD2P1-201ENST00000417812 300 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 AL139396.1-201ENST00000421137 167 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 YWHAZP8-201ENST00000436935 731 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.36□□□□□ -1.71
CD248Q9HCU0 RPL21P104-201ENST00000464143 478 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 AL049714.1-201ENST00000466686 347 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 AC010655.3-201ENST00000478818 450 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 AL132838.2-201ENST00000492041 314 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 RN7SL812P-201ENST00000493791 279 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 AC092436.1-201ENST00000506450 503 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 AC099522.1-202ENST00000514718 367 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 RNA5SP519-201ENST00000516480 119 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 RNU6-1038P-201ENST00000516516 104 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 RNA5SP143-201ENST00000516936 115 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 AP005902.1-201ENST00000521358 186 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.36□□□□□ -1.71
CD248Q9HCU0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.36□□□□□ -1.71
CD248Q9HCU0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.36□□□□□ -1.71
CD248Q9HCU0 AC073539.2-201ENST00000597113 165 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 AC006023.2-201ENST00000609916 167 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 AL021997.2-201ENST00000615674 271 ntBASIC4.36□□□□□ -1.71
CD248Q9HCU0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CD248Q9HCU0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CD248Q9HCU0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.36□□□□□ -1.71
CD248Q9HCU0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
CD248Q9HCU0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.36□□□□□ -1.71
CD248Q9HCU0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CD248Q9HCU0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CD248Q9HCU0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD248Q9HCU0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.35□□□□□ -1.71
CD248Q9HCU0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD248Q9HCU0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CD248Q9HCU0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.35□□□□□ -1.71
CD248Q9HCU0 AL139276.1-201ENST00000311910 1001 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD248Q9HCU0 MIR423-201ENST00000362201 94 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 Y_RNA.5-201ENST00000362334 102 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 SNORA62.1-201ENST00000364287 154 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 RNY3P13-201ENST00000365542 102 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 RNA5SP283-201ENST00000365604 119 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CD248Q9HCU0 RNU6-1207P-201ENST00000384343 107 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 MIR558-201ENST00000384920 94 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 SNORA48.7-201ENST00000391302 135 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 DSTNP4-201ENST00000399472 474 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 AL445189.1-201ENST00000405722 338 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.35□□□□□ -1.71
CD248Q9HCU0 AC017083.1-201ENST00000428093 483 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD248Q9HCU0 TIMM9P1-201ENST00000436122 256 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.35□□□□□ -1.71
CD248Q9HCU0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.35□□□□□ -1.71
CD248Q9HCU0 SNRPGP3-201ENST00000469405 227 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 TRBVA-201ENST00000498804 316 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.35□□□□□ -1.71
CD248Q9HCU0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.35□□□□□ -1.71
CD248Q9HCU0 SNORA25.10-201ENST00000515926 124 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 RNA5SP454-201ENST00000517231 127 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.35□□□□□ -1.71
CD248Q9HCU0 AP000763.2-201ENST00000540641 163 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 AL118558.2-201ENST00000556294 238 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 MTCO3P23-201ENST00000561363 289 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms