Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 AC010733.2-201ENST00000589496 5702 ntBASIC5.1□□□□□ -1.59
CWC22Q9HCG8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.1□□□□□ -1.59
CWC22Q9HCG8 CTHRC1P1-201ENST00000605383 469 ntBASIC5.1□□□□□ -1.59
CWC22Q9HCG8 AC012603.1-201ENST00000606424 528 ntBASIC5.1□□□□□ -1.59
CWC22Q9HCG8 AL442067.1-201ENST00000613261 223 ntBASIC5.1□□□□□ -1.59
CWC22Q9HCG8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.1□□□□□ -1.59
CWC22Q9HCG8 AC244517.12-201ENST00000623581 663 ntBASIC5.1□□□□□ -1.59
CWC22Q9HCG8 AC112484.5-201ENST00000624189 228 ntBASIC5.1□□□□□ -1.59
CWC22Q9HCG8 AC016588.2-201ENST00000632484 3021 ntBASIC5.1□□□□□ -1.59
CWC22Q9HCG8 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CWC22Q9HCG8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CWC22Q9HCG8 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CWC22Q9HCG8 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 RNU5A-8P-201ENST00000364102 114 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 Y_RNA.395-201ENST00000383945 109 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 RNU6-606P-201ENST00000384721 111 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 MIR554-201ENST00000384874 96 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 RNU11-4P-201ENST00000391149 133 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 CISD1P1-201ENST00000393907 327 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 RNU4-26P-201ENST00000410270 107 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 USP9YP16-201ENST00000430287 407 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 AC004866.2-201ENST00000438285 481 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 RPL32P28-201ENST00000443577 397 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 USP9YP23-201ENST00000455085 407 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 AC025554.1-201ENST00000505641 188 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 FTH1P21-201ENST00000512179 511 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 RNU4-29P-201ENST00000515943 174 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 RPL7P20-201ENST00000520308 745 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.09□□□□□ -1.59
CWC22Q9HCG8 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 AC006254.3-201ENST00000603353 884 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 MIR7702-201ENST00000621931 59 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 MIR492-201ENST00000638676 116 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 AL136164.4-201ENST00000625013 2135 ntBASIC5.09□□□□□ -1.59
CWC22Q9HCG8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CWC22Q9HCG8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.09□□□□□ -1.6
CWC22Q9HCG8 AL158163.1-201ENST00000603915 1649 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 Y_RNA.197-201ENST00000364004 102 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 RNU6-39P-201ENST00000384344 107 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 RN7SKP202-201ENST00000410439 330 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 RNA5SP306-201ENST00000411087 107 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 OR4K11P-201ENST00000431829 904 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 RPL23AP89-201ENST00000439324 255 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 AC079781.2-201ENST00000446424 169 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 RPL23AP31-201ENST00000456160 467 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 Y_RNA.635-201ENST00000459041 101 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 RPL35AP15-201ENST00000468042 339 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 RPL21P99-201ENST00000480369 423 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 AC093303.1-201ENST00000514549 295 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 SNORA31.8-201ENST00000516327 108 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 RNU6-798P-201ENST00000516912 103 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 AC006064.5-201ENST00000541782 248 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 AC063950.1-201ENST00000552036 308 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 RPL23AP87-202ENST00000573039 466 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 COX6CP3-201ENST00000580869 223 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 AC245389.1-201ENST00000605141 529 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 AL021997.2-201ENST00000615674 271 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 uc_338.22-201ENST00000622722 187 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 RNA5SP196-201ENST00000625967 102 ntBASIC5.08□□□□□ -1.6
CWC22Q9HCG8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CWC22Q9HCG8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CWC22Q9HCG8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CWC22Q9HCG8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CWC22Q9HCG8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CWC22Q9HCG8 MIR514A2-201ENST00000385131 88 ntBASIC5.07□□□□□ -1.6
CWC22Q9HCG8 MIR514A3-201ENST00000385132 88 ntBASIC5.07□□□□□ -1.6
CWC22Q9HCG8 AC009310.1-201ENST00000414414 451 ntBASIC5.07□□□□□ -1.6
CWC22Q9HCG8 RAC1P3-201ENST00000416129 580 ntBASIC5.07□□□□□ -1.6
CWC22Q9HCG8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.07□□□□□ -1.6
CWC22Q9HCG8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.07□□□□□ -1.6
CWC22Q9HCG8 HMGB3P11-201ENST00000440127 604 ntBASIC5.07□□□□□ -1.6
CWC22Q9HCG8 AC093156.1-201ENST00000440382 670 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms