Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 BTF3P12-201ENST00000519620 469 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 NACAP3-201ENST00000552100 481 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 AC135628.1-201ENST00000568867 534 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 AC007151.1-201ENST00000572774 483 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 UBE2L4-201ENST00000587688 464 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 AC007349.4-201ENST00000608114 532 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 AC104237.2-201ENST00000612456 443 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 AC107075.1-201ENST00000613695 314 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 AL158801.5-201ENST00000623123 465 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 AC004808.1-201ENST00000627671 721 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 MIR3199-2-201ENST00000636243 86 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 ELF2P3-201ENST00000445099 1506 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LRRC40Q9H9A6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 Y_RNA.192-201ENST00000363977 102 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 SNORA67.1-201ENST00000364749 141 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 RNU6-220P-201ENST00000390919 107 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 MTCO1P17-201ENST00000411522 491 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 RPL21P24-201ENST00000413752 448 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 MTATP6P20-201ENST00000414147 562 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 RPS3AP37-201ENST00000419176 745 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 MTND1P28-201ENST00000435623 950 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 CR769767.1-201ENST00000436337 346 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AC098831.1-201ENST00000440661 216 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AC020550.1-201ENST00000447385 163 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AC073901.1-201ENST00000462471 408 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AC010631.1-201ENST00000474150 156 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AC021146.8-201ENST00000507455 733 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 MTCO2P15-201ENST00000532655 656 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AC018645.2-201ENST00000609151 472 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 MTND5P29-201ENST00000458676 1807 ntBASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LRRC40Q9H9A6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 RNU1-73P-201ENST00000383971 164 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 ANAPC10P1-201ENST00000395991 556 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 RPS4XP7-201ENST00000406274 780 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 USP9YP26-201ENST00000421008 661 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 SKA2P1-201ENST00000425592 390 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AL831737.1-201ENST00000441288 271 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 MTCO1P27-201ENST00000448269 226 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AP000542.1-201ENST00000448473 371 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AL109933.2-201ENST00000452651 260 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 RN7SL432P-201ENST00000484057 298 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 HMGB3P3-201ENST00000510526 400 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 RNA5SP402-201ENST00000517148 110 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 MIR3199-1-201ENST00000582434 88 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AL589743.7-201ENST00000612637 233 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AL449363.1-201ENST00000617815 186 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AC007998.5-201ENST00000622938 237 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AP000676.3-201ENST00000623299 569 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 AC112204.3-201ENST00000623822 332 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 U2.21-201ENST00000637295 81 ntBASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
LRRC40Q9H9A6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LRRC40Q9H9A6 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LRRC40Q9H9A6 SNORD116.1-201ENST00000365628 92 ntBASIC2.47□□□□□ -2.01
LRRC40Q9H9A6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
LRRC40Q9H9A6 RNU1-52P-201ENST00000384190 164 ntBASIC2.47□□□□□ -2.01
LRRC40Q9H9A6 MIR518C-201ENST00000384822 101 ntBASIC2.47□□□□□ -2.01
LRRC40Q9H9A6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.47□□□□□ -2.01
LRRC40Q9H9A6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.47□□□□□ -2.01
LRRC40Q9H9A6 AC083875.1-201ENST00000419509 405 ntBASIC2.47□□□□□ -2.01
LRRC40Q9H9A6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms