Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 MIR5092-201ENST00000583139 88 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AP000787.2-201ENST00000604432 568 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AC092106.3-201ENST00000611308 722 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AC022960.3-201ENST00000619794 441 ntBASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
POLR1EQ9GZS1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 RNU1-138P-201ENST00000384093 164 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 RNU6-83P-201ENST00000384568 112 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 MIR196B-201ENST00000384852 84 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 PIGPP2-201ENST00000411569 458 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AC023141.4-201ENST00000412031 328 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 TXNL1P1-201ENST00000429528 554 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 USP12PX-201ENST00000432383 1057 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AC104389.3-201ENST00000445629 235 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 MTCO1P27-201ENST00000448269 226 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AC093281.2-201ENST00000510153 597 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AC008716.1-201ENST00000511084 513 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 MTND5P13-201ENST00000513046 1079 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AC123904.3-201ENST00000547218 814 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 MIR3616-201ENST00000584070 92 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 BNIP3P40-201ENST00000596017 556 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AL596327.1-201ENST00000603629 213 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AL450336.1-201ENST00000605180 586 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AC112220.3-201ENST00000605502 502 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AC135507.1-201ENST00000607214 561 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AC097478.2-201ENST00000610572 514 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AL136981.2-201ENST00000617319 734 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AP003485.2-201ENST00000623636 610 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 FO624990.1-201ENST00000636373 85 ntBASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
POLR1EQ9GZS1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 Y_RNA.245-201ENST00000364493 95 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 MIR513B-201ENST00000385136 84 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 SNRPEP9-201ENST00000436794 238 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AL109933.2-201ENST00000452651 260 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 RPL37P6-201ENST00000460682 294 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AP001486.1-201ENST00000463339 476 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AL049873.1-201ENST00000480540 376 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 RN7SL432P-201ENST00000484057 298 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 TPT1P8-201ENST00000510120 555 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 MTCO2P15-201ENST00000532655 656 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AC009163.5-201ENST00000575421 637 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AL356280.1-201ENST00000603614 379 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AC007349.4-201ENST00000608114 532 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AC010297.1-201ENST00000623948 149 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 AC068057.2-201ENST00000624047 895 ntBASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.6□□□□□ -1.99
POLR1EQ9GZS1 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.59□□□□□ -1.99
POLR1EQ9GZS1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
POLR1EQ9GZS1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
POLR1EQ9GZS1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
POLR1EQ9GZS1 TAS2R15P-201ENST00000390674 928 ntBASIC2.59□□□□□ -1.99
POLR1EQ9GZS1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
POLR1EQ9GZS1 RPL21P24-201ENST00000413752 448 ntBASIC2.59□□□□□ -1.99
POLR1EQ9GZS1 AC080125.1-201ENST00000414888 684 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms