Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXP3Q9BZS1 AL110118.1-201ENST00000553543 400 ntBASIC4.62□□□□□ -1.67
FOXP3Q9BZS1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXP3Q9BZS1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXP3Q9BZS1 AC104695.3-201ENST00000604052 296 ntBASIC4.62□□□□□ -1.67
FOXP3Q9BZS1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.62□□□□□ -1.67
FOXP3Q9BZS1 AC007546.2-201ENST00000623996 360 ntBASIC4.62□□□□□ -1.67
FOXP3Q9BZS1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXP3Q9BZS1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
FOXP3Q9BZS1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXP3Q9BZS1 HSPA8P4-201ENST00000511877 1920 ntBASIC4.62□□□□□ -1.67
FOXP3Q9BZS1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 CPHL1P-201ENST00000461341 3407 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AL356489.2-201ENST00000566968 3528 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 FAM91A3P-201ENST00000456826 2544 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 SNORD62.1-201ENST00000362541 86 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 RNU6-190P-201ENST00000384154 102 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 Y_RNA.476-201ENST00000384347 108 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AC110754.1-201ENST00000399740 601 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 Z99755.1-201ENST00000414048 380 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 USMG5P1-201ENST00000425964 177 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 PSMA2P3-201ENST00000429685 675 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AL359672.1-201ENST00000442302 409 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 CECR9-201ENST00000453421 199 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AC010469.1-201ENST00000463864 576 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AC110794.1-201ENST00000505816 425 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 PARP4P3-201ENST00000510265 317 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AC007016.1-201ENST00000512110 244 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 Y_RNA.689-201ENST00000516589 107 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AC022790.1-201ENST00000522872 204 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AC026371.1-201ENST00000551867 419 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 MYL12BP1-201ENST00000569826 507 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AC067852.3-201ENST00000589177 561 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 U3.53-201ENST00000628922 216 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 ZNF137P-201ENST00000456718 1920 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AC005592.1-201ENST00000566527 1640 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AL158163.1-201ENST00000603915 1649 ntBASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
FOXP3Q9BZS1 AC011266.1-201ENST00000624119 3569 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 RNA5SP502-201ENST00000362694 119 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 SNORD113.2-201ENST00000364166 89 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 Y_RNA.428-201ENST00000384078 102 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 MIR135A2-201ENST00000384854 100 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 MIR93-201ENST00000385024 80 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 MIR1250-201ENST00000408098 113 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 SNORA11-201ENST00000408789 128 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 RNA5SP104-201ENST00000410989 118 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 AC099677.1-201ENST00000420575 175 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 RPEP3-201ENST00000425462 676 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 USP9YP16-201ENST00000430287 407 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 MRPS18BP2-201ENST00000434310 759 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 HLA-N-201ENST00000437516 135 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 NEFMP1-201ENST00000443423 1006 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 AC009963.2-201ENST00000453431 138 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 USP9YP23-201ENST00000455085 407 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 AC104136.1-201ENST00000512969 394 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 RNU6-635P-201ENST00000516651 102 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 RNU6-352P-201ENST00000516908 107 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 RNU6-264P-201ENST00000517134 104 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 AC009812.2-201ENST00000517657 457 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 AC087854.1-201ENST00000519706 414 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 AC104763.2-201ENST00000604179 382 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 AC007619.2-201ENST00000605743 379 ntBASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
FOXP3Q9BZS1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms