Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 RNU1-103P-201ENST00000516502 125 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 MIR3200-201ENST00000580767 85 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 MIR4307-201ENST00000582802 84 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 PRELID3BP8-201ENST00000604148 295 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 AL355472.4-201ENST00000610233 626 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 AL050303.3-201ENST00000613704 284 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 AL035425.3-201ENST00000564206 4996 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 AC004520.1-201ENST00000608362 1413 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 UBE2L2-201ENST00000254302 429 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 NDUFS5P1-201ENST00000405668 289 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AC096664.2-201ENST00000411843 406 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 USP9YP6-201ENST00000413550 854 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AL008987.1-201ENST00000415528 237 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AC093156.1-201ENST00000440382 670 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AL671855.1-201ENST00000446875 1203 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 DPPA3P1-201ENST00000448050 469 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AL441985.1-201ENST00000457727 251 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 TRBV1-201ENST00000476502 284 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AC008885.1-201ENST00000514930 301 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 RNU6-678P-201ENST00000516832 109 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AL356432.3-201ENST00000568952 465 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 ISCA1P3-201ENST00000577104 373 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AC024619.4-201ENST00000580924 316 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 MIR4999-201ENST00000585029 91 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AP000403.1-201ENST00000603349 851 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AP000811.1-201ENST00000603803 651 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AC005000.2-201ENST00000605468 310 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 AC135507.2-201ENST00000612443 309 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 ADAM3A-203ENST00000461344 2157 ntBASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.94□□□□□ -1.78
CHMP4AQ9BY43 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 SNORD113-6-201ENST00000363345 75 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 RPS7P13-201ENST00000413955 498 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 OR2AS1P-201ENST00000427827 319 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 FCF1P1-201ENST00000432690 571 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 AC020699.1-201ENST00000505161 445 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 RNA5SP341-201ENST00000516261 117 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 RNU6-703P-201ENST00000516946 107 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 AGGF1P5-201ENST00000567900 919 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 AC174048.1-201ENST00000603389 144 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 AP000787.2-201ENST00000604432 568 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 AL160281.1-201ENST00000605307 311 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 uc_338.12-201ENST00000616344 181 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 AL031667.3-201ENST00000620124 655 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 AC091953.5-201ENST00000622919 233 ntBASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CHMP4AQ9BY43 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 MTND4P27-201ENST00000450813 1354 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 RNU6-805P-201ENST00000365643 106 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 RPS27AP14-201ENST00000422868 454 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 RAC1P6-201ENST00000423911 575 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 AL353729.1-201ENST00000425044 720 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 AL353777.1-201ENST00000425552 326 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 SUMO1P4-201ENST00000429430 302 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 AC010153.1-201ENST00000432862 727 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 AIG1P1-201ENST00000503376 148 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 AC083906.5-201ENST00000503722 328 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 SCARNA20.6-201ENST00000517251 106 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 BTF3P12-201ENST00000519620 469 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 AC011979.2-201ENST00000527568 352 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 AC024153.1-201ENST00000603103 365 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 AL589743.7-201ENST00000612637 233 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 TEX21P-201ENST00000447107 1476 ntBASIC3.92□□□□□ -1.78
CHMP4AQ9BY43 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHMP4AQ9BY43 AL391994.1-201ENST00000254724 282 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms