Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 SCARNA3-201ENST00000517097 143 ntBASIC1.86□□□□□ -2.11
CDCA4Q9BXL8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.86□□□□□ -2.11
CDCA4Q9BXL8 ANP32BP3-201ENST00000559213 706 ntBASIC1.86□□□□□ -2.11
CDCA4Q9BXL8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.86□□□□□ -2.11
CDCA4Q9BXL8 AC138915.2-201ENST00000569776 97 ntBASIC1.86□□□□□ -2.11
CDCA4Q9BXL8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
CDCA4Q9BXL8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.86□□□□□ -2.11
CDCA4Q9BXL8 FTX_3.1-201ENST00000610451 147 ntBASIC1.86□□□□□ -2.11
CDCA4Q9BXL8 AP001486.3-201ENST00000615334 372 ntBASIC1.86□□□□□ -2.11
CDCA4Q9BXL8 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.86□□□□□ -2.11
CDCA4Q9BXL8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
CDCA4Q9BXL8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CDCA4Q9BXL8 MTCO1P9-201ENST00000505577 1534 ntBASIC1.86□□□□□ -2.11
CDCA4Q9BXL8 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 RNU6-140P-201ENST00000384566 108 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 MIR17-201ENST00000385012 84 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 BTF3P7-201ENST00000407097 488 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AL450338.1-201ENST00000407987 512 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 RNU2-40P-201ENST00000410833 196 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 PTP4A1P7-201ENST00000423476 514 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC008850.1-201ENST00000427546 362 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 UBE2FP3-201ENST00000436366 524 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 USP9YP8-201ENST00000441913 500 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 MOB1AP2-201ENST00000446060 614 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 PSPHP1-201ENST00000450062 261 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC072039.1-201ENST00000477611 581 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 MTCO2P9-201ENST00000503214 694 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC027338.1-201ENST00000514840 825 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 RNU1-41P-201ENST00000516161 162 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 RNU1-48P-201ENST00000516400 162 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 HSPE1P18-201ENST00000517602 280 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 HSPA8P13-201ENST00000523715 472 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 SNRPGP1-201ENST00000553864 222 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AL138976.2-201ENST00000563989 694 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 MIR3199-1-201ENST00000582434 88 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC078899.2-201ENST00000595282 212 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC005776.1-201ENST00000603164 290 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC087241.4-201ENST00000612441 480 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AL589743.7-201ENST00000612637 233 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC010678.1-201ENST00000614118 713 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC010975.3-201ENST00000618727 978 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC008443.7-201ENST00000622195 246 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 AC005539.1-201ENST00000443768 1479 ntBASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.85□□□□□ -2.11
CDCA4Q9BXL8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AL109809.4-201ENST00000603520 2185 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AL109755.1-201ENST00000401791 649 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 MIR1261-201ENST00000408659 82 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 RNA5SP489-201ENST00000410986 109 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 DPH3P2-201ENST00000422618 250 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 MTCYBP11-201ENST00000447254 1109 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 RPL39P6-201ENST00000448289 150 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AL353705.4-201ENST00000449661 238 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 OFD1P3Y-201ENST00000453312 783 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 RNA5SP233-201ENST00000459153 113 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AC022447.3-201ENST00000506865 495 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 MIR892C-201ENST00000516410 77 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 OR8K2P-201ENST00000524645 927 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AP001189.2-201ENST00000527320 189 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AL359212.1-201ENST00000556608 614 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AL021997.1-201ENST00000605757 193 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AC078880.5-201ENST00000617845 421 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 AP002791.1-201ENST00000623291 381 ntBASIC1.84□□□□□ -2.11
CDCA4Q9BXL8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms