Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC006020.1-201ENST00000420179 1854 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 RNA5SP119-201ENST00000362715 117 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 RNU1-33P-201ENST00000364249 162 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 Y_RNA.381-201ENST00000365666 102 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 SNORA9-201ENST00000384215 133 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 MTND3P8-201ENST00000412909 339 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AC012065.2-201ENST00000421295 375 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 PSMA2P3-201ENST00000429685 675 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AL590233.1-201ENST00000430017 456 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 IFNA20P-201ENST00000436840 528 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 RNU7-63P-201ENST00000459054 62 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AC087879.1-201ENST00000474343 374 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AC096576.1-201ENST00000489014 359 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AC105417.1-201ENST00000514691 285 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 SNORA74D-201ENST00000516404 141 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 RN7SKP277-201ENST00000516895 283 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 RNU6-410P-201ENST00000517006 107 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 RNU6-1231P-201ENST00000517185 103 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AP003072.1-201ENST00000531740 145 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AC098848.2-201ENST00000588023 330 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AC010525.2-201ENST00000590920 195 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AC025946.2-201ENST00000603398 234 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AP000942.4-201ENST00000604811 241 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 Z84480.1-201ENST00000605131 311 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AL391813.2-201ENST00000609113 322 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AL354950.2-201ENST00000617939 290 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 AC009248.2-201ENST00000619826 254 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 TPTEP1-208ENST00000636884 213 ntBASIC4.12□□□□□ -1.75
SALL3Q9BXA9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SALL3Q9BXA9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SALL3Q9BXA9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SALL3Q9BXA9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SALL3Q9BXA9 RIOK3P1-201ENST00000418778 1528 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SALL3Q9BXA9 RNU6-356P-201ENST00000384140 107 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 RPS29P4-201ENST00000414733 161 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 MTCO2P12-201ENST00000427426 682 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AL159987.2-201ENST00000432754 307 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.11□□□□□ -1.75
SALL3Q9BXA9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SALL3Q9BXA9 RPS15AP9-201ENST00000439856 381 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AC087385.1-201ENST00000475062 312 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AL163973.1-201ENST00000484753 577 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AC055855.1-201ENST00000489563 579 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 RPL7P47-201ENST00000497299 556 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.11□□□□□ -1.75
SALL3Q9BXA9 RNA5SP337-201ENST00000517007 109 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AC107934.2-201ENST00000518653 310 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AC135001.1-201ENST00000544546 283 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.11□□□□□ -1.75
SALL3Q9BXA9 BNIP3P6-201ENST00000549284 499 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AL121821.2-201ENST00000556081 394 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AC026470.2-201ENST00000561492 181 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AC090615.1-201ENST00000577519 154 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 SRGNP1-201ENST00000603392 451 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AL133255.1-201ENST00000606374 441 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AL365204.3-201ENST00000612448 685 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AC130324.3-201ENST00000614165 542 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 uc_338.32-201ENST00000615087 172 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AL596245.1-201ENST00000618994 362 ntBASIC4.11□□□□□ -1.75
SALL3Q9BXA9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.11□□□□□ -1.75
SALL3Q9BXA9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SALL3Q9BXA9 MTND4P35-201ENST00000604257 1375 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AC017071.1-201ENST00000564407 2204 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SALL3Q9BXA9 Y_RNA.58-201ENST00000362807 102 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 Y_RNA.154-201ENST00000363624 102 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 RNY3P1-201ENST00000365085 102 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 RNY3-201ENST00000365484 102 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AL133412.1-201ENST00000380194 2992 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 Y_RNA.490-201ENST00000384413 102 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 TXNP7-201ENST00000406296 293 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 RNU2-21P-201ENST00000410368 188 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AC126124.2-201ENST00000413542 321 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AL356968.1-201ENST00000416622 474 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 MRPL50P4-201ENST00000446432 475 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms