Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AC027290.2-201ENST00000623210 18662 ntBASIC4.34□□□□□ -1.72
YIPF4Q9BSR8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 ZNF807-201ENST00000328088 1707 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 AC079741.1-201ENST00000321498 212 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 Y_RNA.193-201ENST00000363979 102 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 RNU6-593P-201ENST00000364716 112 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 RNU6-1303P-201ENST00000364841 107 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 RNU6-190P-201ENST00000384154 102 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 RNY1P14-201ENST00000384426 108 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 RNU6-95P-201ENST00000384697 107 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 AL391417.1-201ENST00000404100 426 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 Y_RNA.594-201ENST00000410373 140 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 AC009237.10-201ENST00000414112 510 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 HIGD1AP11-201ENST00000438361 280 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 NEFMP1-201ENST00000443423 1006 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 RPL12P25-201ENST00000455592 494 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 RN7SL385P-201ENST00000468873 276 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 RPS4XP13-201ENST00000483219 789 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 FTH1P9-201ENST00000513251 355 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 RNU6-120P-201ENST00000516077 103 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 SNORA70.16-201ENST00000516390 95 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 RNU6-352P-201ENST00000516908 107 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 MIR4284-201ENST00000578924 81 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 AL672296.1-201ENST00000427780 2158 ntBASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
YIPF4Q9BSR8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AC008568.2-201ENST00000623862 2313 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 MARK2P15-201ENST00000432204 2186 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 SNORD3E-201ENST00000362899 217 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 Y_RNA.527-201ENST00000384573 102 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 RPS4XP7-201ENST00000406274 780 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 RNA5SP111-201ENST00000411386 101 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 HMGB3P2-201ENST00000411913 584 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 RPL7P10-201ENST00000417407 739 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AC140479.3-201ENST00000418944 1126 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 Z74021.1-201ENST00000423610 407 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AL590383.1-201ENST00000428602 75 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AC005154.2-201ENST00000438110 379 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AL049874.1-201ENST00000489560 388 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 IGLV2-34-201ENST00000490007 283 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 HMGB1P30-201ENST00000492455 606 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AC104164.2-201ENST00000496953 495 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 MTCO2P24-201ENST00000515611 426 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 RN7SKP60-201ENST00000516985 239 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 RN7SKP289-201ENST00000517244 295 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 MIR3941-201ENST00000582572 103 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 MIR3149-201ENST00000584629 83 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AC018462.2-201ENST00000605375 395 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 AC004825.2-201ENST00000616634 455 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 PLCE1P1-201ENST00000622094 305 ntBASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.32□□□□□ -1.72
YIPF4Q9BSR8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
YIPF4Q9BSR8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
YIPF4Q9BSR8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
YIPF4Q9BSR8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
YIPF4Q9BSR8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
YIPF4Q9BSR8 Y_RNA.252-201ENST00000364556 101 ntBASIC4.31□□□□□ -1.72
YIPF4Q9BSR8 DEFB109C-201ENST00000382575 264 ntBASIC4.31□□□□□ -1.72
YIPF4Q9BSR8 DEFB109B-201ENST00000382656 264 ntBASIC4.31□□□□□ -1.72
YIPF4Q9BSR8 RNU6-306P-201ENST00000384617 107 ntBASIC4.31□□□□□ -1.72
YIPF4Q9BSR8 SNORA75.6-201ENST00000391318 127 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms