Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC105252.1-201ENST00000503089 286 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AC108078.2-201ENST00000510750 236 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 MTCO3P28-201ENST00000513351 515 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 RNU6-430P-201ENST00000517078 107 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 MTCO2P4-201ENST00000517968 247 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AC090572.1-201ENST00000519251 160 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 OR5B19P-201ENST00000531766 928 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 ADI1P3-201ENST00000549509 470 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 TGIF1P1-201ENST00000558095 802 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AL391840.1-201ENST00000571144 367 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AC146944.4-201ENST00000602697 718 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AL355598.1-201ENST00000604169 202 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AC080013.6-201ENST00000606185 215 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AC099778.2-201ENST00000610904 211 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AL592295.2-201ENST00000612578 206 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 AC092628.2-201ENST00000622492 339 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 LRRC77P-213ENST00000637727 880 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 MAPK10-362ENST00000641864 4484 ntBASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HERPUD2Q9BSE4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 SNORA73.2-201ENST00000364946 201 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 RNU6-1042P-201ENST00000384204 107 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 NDUFS5P4-201ENST00000412983 318 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 BTF3L4P1-201ENST00000413813 468 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC080125.1-201ENST00000414888 684 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC092809.3-201ENST00000415453 231 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AL109913.1-201ENST00000421173 514 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC010401.1-201ENST00000463867 348 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC126389.1-201ENST00000477436 290 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC116562.3-201ENST00000506136 177 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 RAC1P5-201ENST00000512182 576 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 RNU6-914P-201ENST00000516749 109 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC068587.5-201ENST00000528506 175 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 NACAP3-201ENST00000552100 481 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC005951.1-201ENST00000576706 485 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC245008.1-201ENST00000608123 476 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC005332.10-201ENST00000612725 619 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC091834.1-201ENST00000614543 472 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC009509.4-201ENST00000619202 509 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 AC110079.1-202ENST00000635213 138 ntBASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.62□□□□□ -1.83
HERPUD2Q9BSE4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 GABRG2-229ENST00000641017 3628 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AL513302.2-201ENST00000562313 1842 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AC008669.1-201ENST00000565823 2178 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 Y_RNA.22-201ENST00000362492 102 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 RNU6-179P-201ENST00000363350 107 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 RNU6-1097P-201ENST00000363586 107 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 RNA5SP171-201ENST00000391071 115 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 RNU6-55P-201ENST00000411092 107 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 RNU6-954P-201ENST00000411355 107 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 RPL26P27-201ENST00000414397 437 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 SYF2P2-201ENST00000417620 583 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AP000907.1-201ENST00000428428 510 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AL357552.1-201ENST00000445254 415 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AL358232.1-201ENST00000448030 501 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AC021205.2-201ENST00000480069 347 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 RPL36AP51-201ENST00000487216 318 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 RPS29P20-201ENST00000489592 171 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms