Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 RPL21P104-201ENST00000464143 478 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 MTAPP1-201ENST00000489154 819 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 FTH1P9-201ENST00000513251 355 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC002545.1-201ENST00000592511 181 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC104458.1-201ENST00000608243 463 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AL713922.2-201ENST00000619384 716 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC007998.5-201ENST00000622938 237 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC025034.2-201ENST00000623264 286 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC093648.1-201ENST00000623546 606 ntBASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
PAAF1Q9BRP4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 MTND5P17-201ENST00000418405 1603 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 RNA5SP502-201ENST00000362694 119 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 SMIM11P1-201ENST00000369586 178 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 MIR514A1-201ENST00000385133 98 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 SNORD37.1-201ENST00000390968 65 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AMD1P2-201ENST00000412936 992 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AL356867.1-201ENST00000429623 299 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AC000111.3-201ENST00000433478 193 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 RPL36AP6-201ENST00000435770 321 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 SEPT14P3-201ENST00000439401 183 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 CYCSP32-201ENST00000440548 321 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AL732372.2-207ENST00000445840 183 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 NFU1P2-201ENST00000448700 469 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 SEPT14P2-201ENST00000453405 183 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 RPS29P15-201ENST00000458329 171 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 RNU6-261P-201ENST00000459506 102 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 RPL37P6-201ENST00000460682 294 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 MRPS17P3-201ENST00000465453 385 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AC083798.1-201ENST00000472671 131 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 FCF1P8-201ENST00000510322 597 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 SEPT14P4-201ENST00000513445 186 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 RNA5SP503-201ENST00000517047 117 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 FO082796.1-201ENST00000523795 183 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AP001804.3-201ENST00000525146 880 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AC005476.1-201ENST00000554427 397 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 MTCO3P24-201ENST00000572729 782 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AL158032.1-201ENST00000605401 106 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AC130324.3-201ENST00000614165 542 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 AC068647.1-201ENST00000489539 2265 ntBASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PAAF1Q9BRP4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
PAAF1Q9BRP4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
PAAF1Q9BRP4 AC004520.1-201ENST00000608362 1413 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 Y_RNA.89-201ENST00000363031 102 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 RNU6-996P-201ENST00000365438 107 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 SNORA69-201ENST00000383895 132 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 SNORA48.2-201ENST00000390926 124 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AL391417.1-201ENST00000404100 426 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 RN7SKP111-201ENST00000410349 271 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC063979.1-201ENST00000415539 377 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 MTND4LP11-201ENST00000422184 280 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 RPL27AP8-201ENST00000424277 446 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC091390.3-201ENST00000426478 338 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC016691.1-201ENST00000441321 413 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 TXNP1-201ENST00000441872 371 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 MTCO2P3-201ENST00000442543 421 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 AC020550.1-201ENST00000447385 163 ntBASIC3.65□□□□□ -1.83
PAAF1Q9BRP4 MTND1P18-201ENST00000448191 573 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms