Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VRK1Q99986 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.82□□□□□ -1.8
VRK1Q99986 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VRK1Q99986 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.82□□□□□ -1.8
VRK1Q99986 ZNF285B-201ENST00000561698 1767 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 Y_RNA.301-201ENST00000364990 103 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 SNORA4.3-201ENST00000365564 137 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 RNA5SP219-201ENST00000390940 113 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.81□□□□□ -1.8
VRK1Q99986 RNA5SP129-201ENST00000410276 118 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 RPLP0P7-201ENST00000416050 667 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 BTF3L4P3-201ENST00000418879 476 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.81□□□□□ -1.8
VRK1Q99986 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.81□□□□□ -1.8
VRK1Q99986 AL592045.1-201ENST00000429867 352 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.81□□□□□ -1.8
VRK1Q99986 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.81□□□□□ -1.8
VRK1Q99986 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.81□□□□□ -1.8
VRK1Q99986 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.81□□□□□ -1.8
VRK1Q99986 SNRPGP5-201ENST00000456003 220 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 PPP1R2P5-201ENST00000457256 603 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 FTH1P2-201ENST00000466086 412 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 RPL7P5-201ENST00000471472 736 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 SUMO2P6-201ENST00000505273 288 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 AC009901.1-201ENST00000506703 541 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 AC079140.5-201ENST00000507882 310 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.81□□□□□ -1.8
VRK1Q99986 RNU2-58P-201ENST00000516403 183 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 RNA5SP291-201ENST00000517222 105 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 HSPE1P5-201ENST00000561489 272 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.81□□□□□ -1.8
VRK1Q99986 MIR1273C-201ENST00000578669 77 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.81□□□□□ -1.8
VRK1Q99986 Z99571.1-201ENST00000636677 394 ntBASIC3.81□□□□□ -1.8
VRK1Q99986 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.81□□□□□ -1.8
VRK1Q99986 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.81□□□□□ -1.8
VRK1Q99986 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VRK1Q99986 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VRK1Q99986 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
VRK1Q99986 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.8□□□□□ -1.8
VRK1Q99986 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VRK1Q99986 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.8□□□□□ -1.8
VRK1Q99986 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.8□□□□□ -1.8
VRK1Q99986 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VRK1Q99986 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
VRK1Q99986 RNU6-45P-201ENST00000384471 107 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 AL356967.1-201ENST00000406305 431 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 RPS20P14-201ENST00000412545 360 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.8□□□□□ -1.8
VRK1Q99986 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.8□□□□□ -1.8
VRK1Q99986 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.8□□□□□ -1.8
VRK1Q99986 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.8□□□□□ -1.8
VRK1Q99986 RSL24D1P6-201ENST00000426934 401 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.8□□□□□ -1.8
VRK1Q99986 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.8□□□□□ -1.8
VRK1Q99986 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.8□□□□□ -1.8
VRK1Q99986 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.8□□□□□ -1.8
VRK1Q99986 FABP5P15-201ENST00000453566 214 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 MTCO1P29-201ENST00000496868 288 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.8□□□□□ -1.8
VRK1Q99986 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.8□□□□□ -1.8
VRK1Q99986 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.8□□□□□ -1.8
VRK1Q99986 SNORA14.1-201ENST00000516113 141 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 RNU6-1315P-201ENST00000517187 99 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 RN7SKP289-201ENST00000517244 295 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 AP000889.2-201ENST00000532684 490 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 AP000763.2-201ENST00000540641 163 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 GLYCAM1-201ENST00000546596 285 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.8□□□□□ -1.8
VRK1Q99986 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.8□□□□□ -1.8
VRK1Q99986 MIR6716-201ENST00000613413 80 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 RMST_7.1-201ENST00000621935 268 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 AL512643.1-201ENST00000635735 524 ntBASIC3.8□□□□□ -1.8
VRK1Q99986 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VRK1Q99986 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VRK1Q99986 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
VRK1Q99986 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VRK1Q99986 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VRK1Q99986 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
VRK1Q99986 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.8□□□□□ -1.8
VRK1Q99986 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.8□□□□□ -1.8
VRK1Q99986 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VRK1Q99986 AC090740.1-201ENST00000623193 2262 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VRK1Q99986 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.79□□□□□ -1.8
VRK1Q99986 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VRK1Q99986 AL359693.1-201ENST00000614959 2407 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.79□□□□□ -1.8
VRK1Q99986 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VRK1Q99986 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VRK1Q99986 RNU6-254P-201ENST00000363377 107 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 Y_RNA.212-201ENST00000364177 102 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 Y_RNA.245-201ENST00000364493 95 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 RNU4-76P-201ENST00000364509 141 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 DEFB109C-201ENST00000382575 264 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 DEFB109B-201ENST00000382656 264 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 Y_RNA.535-201ENST00000384612 99 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 AC063979.1-201ENST00000415539 377 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms