Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
NPAS2Q99743 MIR6073-201ENST00000352083 89 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 RNU6-462P-201ENST00000362659 105 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
NPAS2Q99743 RNU6-301P-201ENST00000384277 107 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 RN7SKP266-201ENST00000410232 287 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 UBE2FP1-201ENST00000416536 447 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.52□□□□□ -2.01
NPAS2Q99743 USP9YP13-201ENST00000417797 480 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.52□□□□□ -2.01
NPAS2Q99743 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.52□□□□□ -2.01
NPAS2Q99743 AP000936.2-201ENST00000447151 681 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 TPT1P14-201ENST00000448018 505 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 AP000542.1-201ENST00000448473 371 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.52□□□□□ -2.01
NPAS2Q99743 MTND5P4-201ENST00000514978 288 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.52□□□□□ -2.01
NPAS2Q99743 MTND2P32-201ENST00000521584 1038 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.52□□□□□ -2.01
NPAS2Q99743 CKS1BP7-201ENST00000522230 235 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 AP001372.4-201ENST00000524889 472 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 COX6CP5-201ENST00000527162 228 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
NPAS2Q99743 AL359212.1-201ENST00000556608 614 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.52□□□□□ -2.01
NPAS2Q99743 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.52□□□□□ -2.01
NPAS2Q99743 AC022662.1-201ENST00000580252 331 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 MIR3616-201ENST00000584070 92 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 AC060766.3-201ENST00000591442 263 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 AL450336.1-201ENST00000605180 586 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 AC112220.3-201ENST00000605502 502 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 AC013470.4-201ENST00000619978 986 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 AL136360.1-201ENST00000503377 1900 ntBASIC2.52□□□□□ -2.01
NPAS2Q99743 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.52□□□□□ -2.01
NPAS2Q99743 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NPAS2Q99743 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.51□□□□□ -2.01
NPAS2Q99743 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.51□□□□□ -2.01
NPAS2Q99743 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NPAS2Q99743 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
NPAS2Q99743 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NPAS2Q99743 RNU6-853P-201ENST00000364306 107 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 RNA5SP126-201ENST00000365092 109 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 MIR320C1-201ENST00000408566 88 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 MTCO1P17-201ENST00000411522 491 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.51□□□□□ -2.01
NPAS2Q99743 RPL17P12-201ENST00000413391 526 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.51□□□□□ -2.01
NPAS2Q99743 USP9YP26-201ENST00000421008 661 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.51□□□□□ -2.01
NPAS2Q99743 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.51□□□□□ -2.01
NPAS2Q99743 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.51□□□□□ -2.01
NPAS2Q99743 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.51□□□□□ -2.01
NPAS2Q99743 RPS15AP5-201ENST00000436276 388 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.51□□□□□ -2.01
NPAS2Q99743 AC027673.1-201ENST00000456245 405 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 AC008481.1-201ENST00000463278 396 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 RPS15AP36-201ENST00000492022 382 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.51□□□□□ -2.01
NPAS2Q99743 AC091951.3-201ENST00000504093 246 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NPAS2Q99743 AC093809.1-201ENST00000509155 340 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.51□□□□□ -2.01
NPAS2Q99743 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 SCARNA11.3-201ENST00000517276 130 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.51□□□□□ -2.01
NPAS2Q99743 AC025881.1-201ENST00000518851 512 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.51□□□□□ -2.01
NPAS2Q99743 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.51□□□□□ -2.01
NPAS2Q99743 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.51□□□□□ -2.01
NPAS2Q99743 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.51□□□□□ -2.01
NPAS2Q99743 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.51□□□□□ -2.01
NPAS2Q99743 AC060771.1-201ENST00000582031 164 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
NPAS2Q99743 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 AC105148.1-201ENST00000604961 409 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 AC245517.5-201ENST00000611529 162 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 AC079228.1-201ENST00000624774 1049 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.51□□□□□ -2.01
NPAS2Q99743 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NPAS2Q99743 AL137003.2-201ENST00000606924 2538 ntBASIC2.51□□□□□ -2.01
NPAS2Q99743 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
NPAS2Q99743 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.5□□□□□ -2.01
NPAS2Q99743 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPAS2Q99743 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NPAS2Q99743 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
NPAS2Q99743 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.5□□□□□ -2.01
NPAS2Q99743 RNU6-859P-201ENST00000362728 107 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 RNU6-884P-201ENST00000363889 107 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 RPS4XP8-201ENST00000402039 771 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 USP9YP20-201ENST00000419224 558 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.5□□□□□ -2.01
NPAS2Q99743 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.5□□□□□ -2.01
NPAS2Q99743 ARL5AP4-201ENST00000430731 512 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 USP12PX-201ENST00000432383 1057 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.5□□□□□ -2.01
NPAS2Q99743 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.5□□□□□ -2.01
NPAS2Q99743 RPL12P25-201ENST00000455592 494 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms