Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
VAT1Q99536 AC009902.3-201ENST00000606235 2172 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.06□□□□□ -2.08
VAT1Q99536 AC009487.4-201ENST00000624969 3585 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 AL596028.1-201ENST00000326971 197 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 Y_RNA.408-201ENST00000383987 102 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 RNU6-301P-201ENST00000384277 107 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 SNORA64-201ENST00000384674 134 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 RNU6-952P-201ENST00000391164 108 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 RNU2-33P-201ENST00000410344 192 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 RNU2-49P-201ENST00000410666 184 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 RNU4-72P-201ENST00000410754 173 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 AC068533.2-201ENST00000411872 306 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 AL139156.1-201ENST00000412785 841 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
VAT1Q99536 AL445646.1-201ENST00000431784 216 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 AL139415.2-201ENST00000431968 163 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.05□□□□□ -2.08
VAT1Q99536 RPS15AP5-201ENST00000436276 388 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 Z80107.1-201ENST00000436830 412 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 USP9YP8-201ENST00000441913 500 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 IFNA11P-201ENST00000446352 526 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
VAT1Q99536 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.05□□□□□ -2.08
VAT1Q99536 RNU7-136P-201ENST00000458819 69 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.05□□□□□ -2.08
VAT1Q99536 AC105252.1-201ENST00000503089 286 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 RNA5SP291-201ENST00000517222 105 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 HSPE1P18-201ENST00000517602 280 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.05□□□□□ -2.08
VAT1Q99536 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.05□□□□□ -2.08
VAT1Q99536 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.05□□□□□ -2.08
VAT1Q99536 MIR3912-201ENST00000577566 105 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.05□□□□□ -2.08
VAT1Q99536 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.05□□□□□ -2.08
VAT1Q99536 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 AC069545.1-201ENST00000605671 358 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.05□□□□□ -2.08
VAT1Q99536 AC103710.1-201ENST00000610003 901 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 AL357080.1-201ENST00000617394 239 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 AL445264.1-201ENST00000621719 171 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.05□□□□□ -2.08
VAT1Q99536 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.05□□□□□ -2.08
VAT1Q99536 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
VAT1Q99536 AC080128.1-201ENST00000474389 1917 ntBASIC2.05□□□□□ -2.08
VAT1Q99536 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.04□□□□□ -2.08
VAT1Q99536 OR56A5-201ENST00000340110 738 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 RNU6-884P-201ENST00000363889 107 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 RNU6-1078P-201ENST00000364522 103 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 SNORA23-201ENST00000365128 182 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.04□□□□□ -2.08
VAT1Q99536 RNU6-637P-201ENST00000384050 107 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 RPL23AP29-201ENST00000397284 453 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 MTCO1P56-201ENST00000401674 224 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 AL023284.1-201ENST00000403956 276 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 RN7SKP32-201ENST00000410167 303 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 HMGB3P2-201ENST00000411913 584 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 USP9YP19-201ENST00000412165 485 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 AC007435.1-201ENST00000421086 415 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 AC027124.2-201ENST00000428249 105 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 AC002381.1-201ENST00000447049 280 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.04□□□□□ -2.08
VAT1Q99536 RPL18AP17-201ENST00000455326 198 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 BX322784.1-201ENST00000455793 1077 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 RPS20P22-201ENST00000473700 357 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 AC006499.2-201ENST00000513470 337 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 RNU5F-8P-201ENST00000515941 111 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 RNU6-840P-201ENST00000517275 65 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.04□□□□□ -2.08
VAT1Q99536 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
VAT1Q99536 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
VAT1Q99536 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.04□□□□□ -2.08
VAT1Q99536 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.04□□□□□ -2.08
VAT1Q99536 AC135628.1-201ENST00000568867 534 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.04□□□□□ -2.08
VAT1Q99536 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.04□□□□□ -2.08
VAT1Q99536 AC023158.2-201ENST00000614876 543 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 AL136981.2-201ENST00000617319 734 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 DUXAP9-208ENST00000622815 614 ntBASIC2.04□□□□□ -2.08
VAT1Q99536 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
VAT1Q99536 DDX10P1-201ENST00000448545 1933 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.03□□□□□ -2.08
VAT1Q99536 RNU6-359P-201ENST00000365466 108 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
VAT1Q99536 RNU6-1122P-201ENST00000384449 107 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 RNU6-220P-201ENST00000390919 107 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 RNU6-750P-201ENST00000390946 107 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.03□□□□□ -2.08
VAT1Q99536 TPMTP3-201ENST00000411928 735 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 AL139413.1-201ENST00000421309 217 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 AC013262.1-201ENST00000426710 252 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 AL035407.1-201ENST00000429211 571 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 USP12PX-201ENST00000432383 1057 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.03□□□□□ -2.08
VAT1Q99536 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.03□□□□□ -2.08
VAT1Q99536 MTND4P6-201ENST00000438297 472 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 FAM103A2P-201ENST00000444122 354 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 AL139109.1-201ENST00000455491 297 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms