Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC092447.6-201ENST00000414578 210 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 LSM1P1-201ENST00000438629 273 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.74□□□□□ -2.29
SPENQ96T58 BOLA3P3-201ENST00000505182 232 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 SMARCE1P4-201ENST00000523647 241 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 HSPE1P20-201ENST00000538133 289 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.74□□□□□ -2.29
SPENQ96T58 AC007275.1-201ENST00000621243 671 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 AC073544.1-201ENST00000600110 1595 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 ELL2P3-201ENST00000457883 1602 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 SSXP9-201ENST00000417503 292 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.74□□□□□ -2.29
SPENQ96T58 RBM43P1-201ENST00000476891 1081 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 MIR4636-201ENST00000582271 80 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 AC091304.6-201ENST00000619761 202 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 AC092745.2-202ENST00000411880 369 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.74□□□□□ -2.29
SPENQ96T58 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 SDCBPP1-201ENST00000440192 890 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 AC067942.3-201ENST00000512025 362 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 AP003484.1-201ENST00000530974 250 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.74□□□□□ -2.29
SPENQ96T58 AC106028.5-201ENST00000610332 395 ntBASIC0.74□□□□□ -2.29
SPENQ96T58 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.74□□□□□ -2.29
SPENQ96T58 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SPENQ96T58 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.73□□□□□ -2.29
SPENQ96T58 AC096533.1-201ENST00000411645 353 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.73□□□□□ -2.29
SPENQ96T58 GPM6BP3-201ENST00000442797 145 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.73□□□□□ -2.29
SPENQ96T58 AF279873.1-201ENST00000523393 313 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.73□□□□□ -2.29
SPENQ96T58 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.73□□□□□ -2.29
SPENQ96T58 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.73□□□□□ -2.29
SPENQ96T58 MTND5P11-201ENST00000511037 1812 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SPENQ96T58 AC007785.2-201ENST00000598627 1916 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 MIR17-201ENST00000385012 84 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 FTH1P15-201ENST00000406984 280 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 Z95118.1-201ENST00000421372 247 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 RPL17P49-201ENST00000443728 411 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 AC104685.1-201ENST00000502445 371 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 KLRA1P-201ENST00000503499 986 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.73□□□□□ -2.29
SPENQ96T58 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.73□□□□□ -2.29
SPENQ96T58 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.73□□□□□ -2.29
SPENQ96T58 uc_338.22-201ENST00000622722 187 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 AC067863.3-201ENST00000624172 122 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 RNA5SP276-201ENST00000362580 94 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 RNU6-799P-201ENST00000363567 107 ntBASIC0.73□□□□□ -2.29
SPENQ96T58 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.73□□□□□ -2.29
SPENQ96T58 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.73□□□□□ -2.29
SPENQ96T58 AL157700.1-201ENST00000561973 1432 ntBASIC0.72□□□□□ -2.29
SPENQ96T58 HMGB3P31-201ENST00000413333 595 ntBASIC0.72□□□□□ -2.29
SPENQ96T58 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.72□□□□□ -2.29
SPENQ96T58 AL031663.1-201ENST00000437445 219 ntBASIC0.72□□□□□ -2.29
SPENQ96T58 AC121161.1-201ENST00000510606 652 ntBASIC0.72□□□□□ -2.29
SPENQ96T58 MIR3122-201ENST00000577243 73 ntBASIC0.72□□□□□ -2.29
SPENQ96T58 AC024595.1-201ENST00000623088 387 ntBASIC0.72□□□□□ -2.29
SPENQ96T58 AC008555.8-201ENST00000623602 2168 ntBASIC0.72□□□□□ -2.29
SPENQ96T58 RNU6-173P-201ENST00000364215 104 ntBASIC0.72□□□□□ -2.29
SPENQ96T58 RPL23AP47-201ENST00000408017 460 ntBASIC0.72□□□□□ -2.29
SPENQ96T58 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.72□□□□□ -2.29
SPENQ96T58 BTF3P12-201ENST00000519620 469 ntBASIC0.72□□□□□ -2.29
SPENQ96T58 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.72□□□□□ -2.29
SPENQ96T58 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.71□□□□□ -2.3
SPENQ96T58 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SPENQ96T58 HSPE1P24-201ENST00000450782 238 ntBASIC0.71□□□□□ -2.3
SPENQ96T58 AC083923.1-201ENST00000523708 376 ntBASIC0.71□□□□□ -2.3
SPENQ96T58 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.71□□□□□ -2.3
SPENQ96T58 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.71□□□□□ -2.3
SPENQ96T58 Z99497.1-201ENST00000421282 135 ntBASIC0.71□□□□□ -2.3
SPENQ96T58 RNA5SP471-201ENST00000516971 106 ntBASIC0.71□□□□□ -2.3
SPENQ96T58 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SPENQ96T58 AL589935.2-201ENST00000616471 1231 ntBASIC0.71□□□□□ -2.3
SPENQ96T58 Y_RNA.488-201ENST00000384403 102 ntBASIC0.71□□□□□ -2.3
SPENQ96T58 PRELID3BP11-201ENST00000414230 479 ntBASIC0.71□□□□□ -2.3
SPENQ96T58 USP12PX-201ENST00000432383 1057 ntBASIC0.71□□□□□ -2.3
SPENQ96T58 RNA5SP468-201ENST00000516782 93 ntBASIC0.71□□□□□ -2.3
SPENQ96T58 AC022880.1-201ENST00000534017 973 ntBASIC0.71□□□□□ -2.3
SPENQ96T58 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.71□□□□□ -2.3
SPENQ96T58 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SPENQ96T58 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.71□□□□□ -2.3
SPENQ96T58 AC010889.1-201ENST00000566193 2666 ntBASIC0.7□□□□□ -2.3
SPENQ96T58 MTCO3P46-201ENST00000425787 232 ntBASIC0.7□□□□□ -2.3
SPENQ96T58 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.7□□□□□ -2.3
SPENQ96T58 NAP1L1P3-201ENST00000462291 880 ntBASIC0.7□□□□□ -2.3
SPENQ96T58 HMGN1P10-201ENST00000474557 553 ntBASIC0.7□□□□□ -2.3
SPENQ96T58 RNA5SP285-201ENST00000516619 119 ntBASIC0.7□□□□□ -2.3
SPENQ96T58 SNORA31.20-201ENST00000517111 133 ntBASIC0.7□□□□□ -2.3
SPENQ96T58 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SPENQ96T58 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.7□□□□□ -2.3
SPENQ96T58 SDR42E1P2-201ENST00000614861 481 ntBASIC0.7□□□□□ -2.3
SPENQ96T58 AC126177.8-201ENST00000618339 1015 ntBASIC0.7□□□□□ -2.3
SPENQ96T58 SDR42E1P4-201ENST00000620894 481 ntBASIC0.7□□□□□ -2.3
SPENQ96T58 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SPENQ96T58 UBE2V1P9-201ENST00000414760 368 ntBASIC0.7□□□□□ -2.3
SPENQ96T58 HMGN2P13-201ENST00000476476 274 ntBASIC0.7□□□□□ -2.3
SPENQ96T58 RNA5SP108-201ENST00000605921 117 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms