Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 BTBD10P1-201ENST00000549824 1352 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-1301P-201ENST00000362724 104 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 Y_RNA.357-201ENST00000365487 109 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-147P-201ENST00000383983 107 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-14P-201ENST00000384630 106 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 MIR521-1-201ENST00000384902 87 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 RNU4-30P-201ENST00000410245 143 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 AL512844.2-201ENST00000433990 593 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 KRT8P51-201ENST00000438938 274 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 RPL7L1P1-201ENST00000448259 785 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 AC079354.2-201ENST00000453523 154 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 RNU7-87P-201ENST00000459343 62 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 RPS4XP22-201ENST00000480755 780 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 AC091167.1-201ENST00000492017 396 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 HIGD1AP3-201ENST00000515857 278 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 Y_RNA.709-201ENST00000516952 92 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 MIR8076-201ENST00000611401 83 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 GVINP1-202ENST00000531871 7271 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 AC135776.4-201ENST00000624300 1904 ntBASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.17□□□□□ -1.58
CNTNAP3BQ96NU0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 AC004076.2-201ENST00000620532 3323 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 U8.7-201ENST00000364940 136 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 Y_RNA.405-201ENST00000383979 100 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 Y_RNA.451-201ENST00000384200 100 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-514P-201ENST00000384208 107 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 RNA5SP187-201ENST00000384400 119 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 Y_RNA.524-201ENST00000384564 100 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-178P-201ENST00000384631 104 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 Y_RNA.561-201ENST00000384694 100 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 RNA5SP89-201ENST00000410300 108 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-1064P-201ENST00000410626 104 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 AC011742.1-201ENST00000431448 434 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 AC004938.1-201ENST00000438468 308 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 ANXA2P1-201ENST00000505539 926 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 RNA5SP464-201ENST00000516251 108 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-659P-201ENST00000516454 104 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 AC090617.3-201ENST00000573670 475 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 AC091042.1-201ENST00000579213 173 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 MIR5582-201ENST00000579697 68 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 AC023043.4-201ENST00000612081 449 ntBASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTNAP3BQ96NU0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNTNAP3BQ96NU0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CNTNAP3BQ96NU0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CNTNAP3BQ96NU0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNTNAP3BQ96NU0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNTNAP3BQ96NU0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNTNAP3BQ96NU0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNTNAP3BQ96NU0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.15□□□□□ -1.58
CNTNAP3BQ96NU0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.15□□□□□ -1.58
CNTNAP3BQ96NU0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNTNAP3BQ96NU0 Y_RNA.75-201ENST00000362927 97 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms