Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC009161.2-201ENST00000624626 138 ntBASIC3.14□□□□□ -1.91
CMTM3Q96MX0 AL512643.1-201ENST00000635735 524 ntBASIC3.14□□□□□ -1.91
CMTM3Q96MX0 Z99571.1-201ENST00000636677 394 ntBASIC3.14□□□□□ -1.91
CMTM3Q96MX0 AL392088.2-201ENST00000637607 285 ntBASIC3.14□□□□□ -1.91
CMTM3Q96MX0 MTND5P17-201ENST00000418405 1603 ntBASIC3.14□□□□□ -1.91
CMTM3Q96MX0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AC103710.2-202ENST00000641454 2853 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 FRG1CP-201ENST00000358464 769 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 RNU6-778P-201ENST00000363269 103 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 Y_RNA.318-201ENST00000365131 97 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 RNU6-61P-201ENST00000365528 109 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 RNU1-73P-201ENST00000383971 164 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 MIR301A-201ENST00000385261 86 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AL807761.1-201ENST00000417622 171 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 MORF4L1P6-201ENST00000418771 268 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 SDCBPP3-201ENST00000419629 891 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 USP9YP14-201ENST00000430663 563 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 MTCO2P7-201ENST00000446518 666 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 TPT1P12-201ENST00000448968 492 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AC022364.2-201ENST00000457963 554 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 RPS26P21-201ENST00000475397 348 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 HSPD1P15-201ENST00000505573 1122 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AC010493.1-201ENST00000513479 292 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 RN7SKP21-201ENST00000516503 220 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 SNORA70.19-201ENST00000516717 90 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 MTCYBP20-201ENST00000524239 1129 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AP003122.3-201ENST00000526316 255 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AP003392.2-201ENST00000527269 208 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AC084851.1-201ENST00000529105 249 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 RN7SL600P-201ENST00000581811 299 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 MIR3138-201ENST00000585238 82 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 HMGN2P15-201ENST00000585707 270 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 Z84480.1-201ENST00000605131 311 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 MTND4LP5-201ENST00000605152 292 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 MIR15A-201ENST00000607334 83 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AC012409.4-201ENST00000612923 249 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AC025034.2-201ENST00000623264 286 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AP000553.6-201ENST00000641242 118 ntBASIC3.13□□□□□ -1.91
CMTM3Q96MX0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CMTM3Q96MX0 AC008669.1-201ENST00000565823 2178 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 RNU6-623P-201ENST00000363143 105 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 Y_RNA.367-201ENST00000365544 101 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 SNORA4.3-201ENST00000365564 137 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AL031121.1-201ENST00000406553 254 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 RNU2-16P-201ENST00000410712 136 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 SKA2P1-201ENST00000425592 390 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 VN1R108P-201ENST00000431580 830 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 RN7SL594P-201ENST00000470590 287 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AC126182.1-201ENST00000478134 357 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 RPS29P20-201ENST00000489592 171 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AC139453.3-201ENST00000493276 369 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AL358832.1-201ENST00000497800 389 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 SUMO2P6-201ENST00000505273 288 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AC091133.4-201ENST00000511142 308 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 SNORD27.1-201ENST00000516319 72 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 RNU1-103P-201ENST00000516502 125 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 RNU6-703P-201ENST00000516946 107 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 MIR3939-201ENST00000582614 106 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms