Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC119618.1-201ENST00000434191 222 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AC093156.1-201ENST00000440382 670 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 MTND4P25-201ENST00000441039 533 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 NEFMP1-201ENST00000443423 1006 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 GPM6BP1-201ENST00000446387 144 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 ST13P20-201ENST00000447996 1065 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 MRPS31P2-201ENST00000451581 518 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 ELOCP23-201ENST00000452014 332 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 RPS26P21-201ENST00000475397 348 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 RBM43P1-201ENST00000476891 1081 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 RN7SKP282-201ENST00000516824 299 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AL391261.3-201ENST00000557194 520 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AC083760.1-201ENST00000589621 670 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AC004805.2-201ENST00000605382 482 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AC004832.5-201ENST00000608677 401 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AC108747.1-201ENST00000609508 535 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AC034102.8-201ENST00000615146 484 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AL603755.1-201ENST00000619504 163 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AL589994.2-201ENST00000621124 579 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 UBE2L2-201ENST00000254302 429 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 OR5J1P-201ENST00000313544 939 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 RN7SKP220-201ENST00000410611 288 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 RNU2-68P-201ENST00000410878 191 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 RPL31P12-201ENST00000422587 358 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 MTATP6P17-201ENST00000431030 672 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 UBE2D3P4-201ENST00000441973 436 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 RPS15AP27-201ENST00000449183 343 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 USP9YP12-201ENST00000450481 570 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 CECR9-201ENST00000453421 199 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 MRPS17P3-201ENST00000465453 385 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 RN7SL432P-201ENST00000484057 298 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 RNA5SP356-201ENST00000515972 94 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 RNU2-10P-201ENST00000516375 211 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 RNU6-143P-201ENST00000516942 93 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 AC106038.2-201ENST00000520706 568 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 NDUFB9P3-201ENST00000521269 501 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 AC135628.1-201ENST00000568867 534 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 HMGN2P15-201ENST00000585707 270 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 AC098826.3-201ENST00000603823 466 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 AL391813.2-201ENST00000609113 322 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 AC100793.4-201ENST00000613683 429 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 MIR7153-201ENST00000637758 57 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 MIR622-201ENST00000638396 96 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 AC092435.3-201ENST00000565538 3654 ntBASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.85□□□□□ -1.95
SNRNP40Q96DI7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 RNU6-512P-201ENST00000364438 103 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 RNU5E-5P-201ENST00000365379 116 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 SNORA54-201ENST00000384281 123 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 SNORD15B-201ENST00000384714 146 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 RNA5SP229-201ENST00000410809 99 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 EEF1A1P41-201ENST00000414667 207 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AC019097.1-201ENST00000424783 735 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 ELOCP14-201ENST00000428070 331 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 ELOCP7-201ENST00000439968 331 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 KATNBL1P6-201ENST00000453433 915 ntBASIC2.84□□□□□ -1.95
SNRNP40Q96DI7 AC006539.3-201ENST00000454258 129 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms