Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MTND2P18-201ENST00000419962 1030 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AL139281.1-201ENST00000422120 335 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 BPY2DP-201ENST00000422208 265 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 SKA2P1-201ENST00000425592 390 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC018644.1-201ENST00000429934 551 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 RPL36AP53-201ENST00000432891 316 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC119618.1-201ENST00000434191 222 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC098831.1-201ENST00000440661 216 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 RPS12P18-201ENST00000442381 270 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 RPS15AP27-201ENST00000449183 343 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 RPS27AP10-201ENST00000496103 208 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 RNU7-51P-201ENST00000516560 62 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC026403.1-201ENST00000518938 295 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AP003181.2-201ENST00000528941 181 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AP003122.4-201ENST00000530980 758 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 RPL21P5-201ENST00000554662 472 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC010546.1-201ENST00000569391 485 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 CKS1BP3-201ENST00000600888 237 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC174048.1-201ENST00000603389 144 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AL355877.2-201ENST00000603670 358 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AL627309.6-201ENST00000606857 840 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AC108479.2-201ENST00000617314 601 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AL589994.2-201ENST00000621124 579 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 CR392039.5-201ENST00000623201 510 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS33AQ96AX1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS33AQ96AX1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS33AQ96AX1 SMIM11P1-201ENST00000369586 178 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 RNU2-8P-201ENST00000410727 190 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 AC063979.1-201ENST00000415539 377 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 RPL7P37-201ENST00000425095 738 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 SAR1AP4-201ENST00000429225 591 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 AL133547.1-201ENST00000448546 220 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 RN7SL542P-201ENST00000467147 294 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
VPS33AQ96AX1 RPL31P41-201ENST00000477967 372 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 AC126182.1-201ENST00000478134 357 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 RN7SL499P-201ENST00000481141 276 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 MTND1P3-201ENST00000484956 952 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 RPS29P20-201ENST00000489592 171 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 AC010587.1-201ENST00000505809 469 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS33AQ96AX1 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS33AQ96AX1 RN7SKP43-201ENST00000516173 320 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 Y_RNA.672-201ENST00000516289 104 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 RNU1-45P-201ENST00000517191 141 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 AC026407.1-201ENST00000518369 204 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.01□□□□□ -1.93
VPS33AQ96AX1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS33AQ96AX1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS33AQ96AX1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.01□□□□□ -1.93
VPS33AQ96AX1 HMGN1P30-201ENST00000589286 268 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 AF131215.7-201ENST00000602443 707 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 AL451064.1-201ENST00000607718 471 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 AC100793.4-201ENST00000613683 429 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS33AQ96AX1 MTND5P42-201ENST00000637720 498 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 ELF2P3-201ENST00000445099 1506 ntBASIC3.01□□□□□ -1.93
VPS33AQ96AX1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
VPS33AQ96AX1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS33AQ96AX1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3□□□□□ -1.93
VPS33AQ96AX1 RNU4-21P-201ENST00000362802 126 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 MT-TH-201ENST00000387441 69 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 RN7SKP202-201ENST00000410439 330 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 RPS12P24-201ENST00000412619 387 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 RPS29P4-201ENST00000414733 161 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 AC096649.2-201ENST00000416186 393 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 CYCSP46-201ENST00000423569 204 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
VPS33AQ96AX1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3□□□□□ -1.93
VPS33AQ96AX1 AC091286.1-201ENST00000431233 461 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 CETN4P-201ENST00000432407 469 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 USP9YP15-201ENST00000442391 422 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 COX6CP2-201ENST00000444980 225 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 Z96811.1-201ENST00000445880 108 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3□□□□□ -1.93
VPS33AQ96AX1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3□□□□□ -1.93
VPS33AQ96AX1 MTATP6P7-201ENST00000453315 681 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3□□□□□ -1.93
VPS33AQ96AX1 AC008155.2-201ENST00000464337 397 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3□□□□□ -1.93
VPS33AQ96AX1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3□□□□□ -1.93
VPS33AQ96AX1 RNU1-103P-201ENST00000516502 125 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 RNU6-677P-201ENST00000516914 101 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms