Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC010149.2-201ENST00000637608 315 ntBASIC2.12□□□□□ -2.07
CPNE4Q96A23 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.12□□□□□ -2.07
CPNE4Q96A23 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CPNE4Q96A23 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CPNE4Q96A23 MTCO1P9-201ENST00000505577 1534 ntBASIC2.12□□□□□ -2.07
CPNE4Q96A23 AC069528.2-201ENST00000624849 1991 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CPNE4Q96A23 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CPNE4Q96A23 Y_RNA.311-201ENST00000365068 96 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 MIR122-201ENST00000385044 85 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 RN7SKP140-201ENST00000411196 284 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 AL139413.1-201ENST00000421309 217 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 AL953862.1-201ENST00000423016 168 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 HMGN2P38-201ENST00000423806 265 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 MTND5P14-201ENST00000441481 1267 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 RPL7P36-201ENST00000444633 681 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC002381.1-201ENST00000447049 280 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 ANKRD26P4-201ENST00000455755 950 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 FCF1P6-201ENST00000456841 595 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC128713.1-201ENST00000471495 306 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 TTC39CP1-201ENST00000512513 755 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC118465.1-201ENST00000513820 1271 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 SCARNA15.2-201ENST00000516409 127 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC087241.2-201ENST00000535801 324 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 AL132857.1-201ENST00000555180 708 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC061975.8-201ENST00000587058 721 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 BNIP3P27-201ENST00000599991 412 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 BBIP1P1-201ENST00000602999 279 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC004987.4-201ENST00000603383 338 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 AL158211.4-201ENST00000606988 584 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC004067.1-201ENST00000608733 700 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC025594.3-201ENST00000613068 790 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 AL031601.2-202ENST00000622650 282 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 AC231657.1-201ENST00000624313 397 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.11□□□□□ -2.07
CPNE4Q96A23 DDX10P1-201ENST00000448545 1933 ntBASIC2.11□□□□□ -2.07
CPNE4Q96A23 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CPNE4Q96A23 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.1□□□□□ -2.07
CPNE4Q96A23 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.1□□□□□ -2.07
CPNE4Q96A23 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CPNE4Q96A23 AL161781.1-201ENST00000354277 403 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 RNU5E-8P-201ENST00000363502 116 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 U8.8-201ENST00000365399 135 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 RNU4-52P-201ENST00000384209 138 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 MIR514A1-201ENST00000385133 98 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 RNU4-22P-201ENST00000411058 166 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 RNA5SP508-201ENST00000411327 119 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 TPMTP3-201ENST00000411928 735 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 WARS2P1-201ENST00000429678 537 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 USP12PX-201ENST00000432383 1057 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.1□□□□□ -2.07
CPNE4Q96A23 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.1□□□□□ -2.07
CPNE4Q96A23 EEF1A1P39-201ENST00000440791 250 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 OR10R1P-201ENST00000441524 1141 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 BMI1P1-201ENST00000445879 941 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 HIGD1AP2-201ENST00000446367 280 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 MTND1P9-201ENST00000453775 944 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 USP9YP10-201ENST00000454868 628 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 snoU109.3-201ENST00000459477 145 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 MTND1P16-201ENST00000465177 898 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.1□□□□□ -2.07
CPNE4Q96A23 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.1□□□□□ -2.07
CPNE4Q96A23 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.1□□□□□ -2.07
CPNE4Q96A23 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.1□□□□□ -2.07
CPNE4Q96A23 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.1□□□□□ -2.07
CPNE4Q96A23 AC109445.1-201ENST00000512356 383 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.1□□□□□ -2.07
CPNE4Q96A23 SCARNA17.1-201ENST00000516211 143 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 SCARNA17.2-201ENST00000516334 143 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 AC021451.1-201ENST00000523498 1129 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.1□□□□□ -2.07
CPNE4Q96A23 AP003497.1-201ENST00000528472 562 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CPNE4Q96A23 AL512310.1-201ENST00000548639 172 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CPNE4Q96A23 MIR5007-201ENST00000583098 95 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 AP001269.3-201ENST00000588718 329 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 AL158050.2-201ENST00000605336 568 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 AC005014.3-201ENST00000605985 190 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 SCARNA17.4-201ENST00000614296 143 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 AC009090.3-201ENST00000616553 565 ntBASIC2.1□□□□□ -2.07
CPNE4Q96A23 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
CPNE4Q96A23 AC099786.3-201ENST00000565735 1410 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CPNE4Q96A23 SNORA3A-201ENST00000364113 130 ntBASIC2.09□□□□□ -2.07
CPNE4Q96A23 MIR1284-201ENST00000408337 120 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms