Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC120057.2-201ENST00000571520 271 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 MIR4738-201ENST00000579134 87 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC008752.3-201ENST00000588113 712 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 BNIP3P9-201ENST00000603714 553 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AL109618.2-201ENST00000605527 211 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AP001486.3-201ENST00000615334 372 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC068831.7-201ENST00000616954 363 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AL354950.2-201ENST00000617939 290 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 MIR6500-201ENST00000622700 86 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC011155.2-201ENST00000623202 216 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AL160394.1-201ENST00000624765 724 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC118273.1-201ENST00000525324 3006 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC007256.1-201ENST00000392253 2765 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC103710.2-202ENST00000641454 2853 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 RNU6-996P-201ENST00000365438 107 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AL592045.1-201ENST00000429867 352 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AC016691.1-201ENST00000441321 413 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 DPPA3P1-201ENST00000448050 469 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AL590664.1-201ENST00000448065 339 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 RNU6-261P-201ENST00000459506 102 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 RPL21P11-201ENST00000461458 483 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AC233702.1-201ENST00000482905 502 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 RPL36AP51-201ENST00000487216 318 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 RBBP4P6-201ENST00000508098 202 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AC006445.2-201ENST00000510061 472 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 MIR4703-201ENST00000577728 79 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 MTATP6P3-201ENST00000581686 676 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AC008521.1-201ENST00000587471 187 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AL592436.1-201ENST00000605135 558 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 uc_338.11-201ENST00000619132 160 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AL136164.4-201ENST00000625013 2135 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 AC091152.2-201ENST00000591628 2569 ntBASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RAB40AQ8WXH6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 Y_RNA.402-201ENST00000383972 102 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 RNU6-483P-201ENST00000384088 108 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 Y_RNA.450-201ENST00000384198 113 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 MIR184-201ENST00000384962 84 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 MIR199A2-201ENST00000385289 110 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 CISD1P1-201ENST00000393907 327 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 AL590704.1-201ENST00000402856 794 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 RN7SKP202-201ENST00000410439 330 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 RNA5SP111-201ENST00000411386 101 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 USP9YP27-201ENST00000418455 438 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 AC012498.1-201ENST00000424037 437 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 AC092047.1-201ENST00000424997 240 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 ZNF863P-201ENST00000426746 417 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 AC006989.1-201ENST00000427212 131 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 ARF4P2-201ENST00000430209 526 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 GPM6BP2-201ENST00000432046 144 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 AL596276.1-201ENST00000434465 418 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 USP9YP28-201ENST00000435142 589 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 SETP5-201ENST00000437270 562 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 GPM6BP1-201ENST00000446387 144 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 GMFBP1-201ENST00000467831 427 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 RPS15AP34-201ENST00000487776 387 ntBASIC3.31□□□□□ -1.88
RAB40AQ8WXH6 AC098591.2-201ENST00000510152 315 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms