Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU6-723P-201ENST00000383973 107 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 RNU6-297P-201ENST00000384636 107 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 RNU6-1151P-201ENST00000384684 107 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 RNU2-71P-201ENST00000411395 189 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 MTCO1P17-201ENST00000411522 491 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 AC109780.2-201ENST00000413467 845 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.3□□□□□ -1.88
SNED1Q8TER0 AC233728.2-201ENST00000425348 757 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
SNED1Q8TER0 RPS20P5-201ENST00000434808 360 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 HMGB1P12-201ENST00000438594 598 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 MTCO3P18-201ENST00000440206 761 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 MTCO1P48-201ENST00000448024 1096 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNED1Q8TER0 AC015724.1-201ENST00000478577 156 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.3□□□□□ -1.88
SNED1Q8TER0 HMGB1P28-201ENST00000507778 552 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 NDUFB4P2-201ENST00000509515 391 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.3□□□□□ -1.88
SNED1Q8TER0 RNA5SP320-201ENST00000516263 124 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 RNA5SP135-201ENST00000517019 125 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.3□□□□□ -1.88
SNED1Q8TER0 AC091489.2-201ENST00000566263 604 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.3□□□□□ -1.88
SNED1Q8TER0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.3□□□□□ -1.88
SNED1Q8TER0 FGF7P1-201ENST00000582820 288 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 AL596327.1-201ENST00000603629 213 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 AC008945.2-201ENST00000606056 604 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 HMGN2P28-201ENST00000606102 262 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 AP001330.5-201ENST00000607176 411 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 Y_RNA.804-201ENST00000615262 101 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.3□□□□□ -1.88
SNED1Q8TER0 AC010338.1-201ENST00000621823 717 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 MIR7843-201ENST00000622274 79 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 DUXAP9-208ENST00000622815 614 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 AC092608.2-201ENST00000624427 218 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.3□□□□□ -1.88
SNED1Q8TER0 CTSLP2-204ENST00000629029 392 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNED1Q8TER0 AL354685.2-201ENST00000448218 1447 ntBASIC3.3□□□□□ -1.88
SNED1Q8TER0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNED1Q8TER0 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNED1Q8TER0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNED1Q8TER0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNED1Q8TER0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNED1Q8TER0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNED1Q8TER0 RNU1-35P-201ENST00000362782 153 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 RNU5F-6P-201ENST00000362979 116 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 Y_RNA.813-201ENST00000364639 102 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 Y_RNA.372-201ENST00000365599 102 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNED1Q8TER0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNED1Q8TER0 Y_RNA.450-201ENST00000384198 113 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 SSXP10-201ENST00000402595 565 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 CIR1P3-201ENST00000405137 479 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNED1Q8TER0 HMGB1P11-201ENST00000413899 637 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC003685.2-201ENST00000422795 395 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 YWHAZP8-201ENST00000436935 731 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC092427.1-201ENST00000439177 601 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 GDI2P2-201ENST00000445131 608 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 TPT1P14-201ENST00000448018 505 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC092001.1-201ENST00000453012 261 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 snoU109.1-201ENST00000459339 135 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 snoU13.26-201ENST00000459452 105 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 RPS27P29-201ENST00000463110 252 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC078785.3-201ENST00000476607 425 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 AP004217.1-201ENST00000480579 346 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC008628.2-201ENST00000502605 298 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC104057.1-201ENST00000515547 497 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 Y_RNA.673-201ENST00000516306 88 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 RNU6-885P-201ENST00000516607 104 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AP002748.2-201ENST00000528671 348 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC243972.3-201ENST00000539655 198 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC004217.3-201ENST00000551552 878 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 MIR3913-1-201ENST00000577744 102 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AL355812.1-201ENST00000603215 216 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC104458.1-201ENST00000608243 463 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AP004247.3-201ENST00000608682 624 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC002553.4-201ENST00000616896 331 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 LRRC77P-213ENST00000637727 880 ntBASIC3.29□□□□□ -1.88
SNED1Q8TER0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.29□□□□□ -1.88
SNED1Q8TER0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNED1Q8TER0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNED1Q8TER0 ZNF37BP-203ENST00000452306 1352 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms