Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.71□□□□□ -1.82
USP38Q8NB14 SNHG22-203ENST00000617833 660 ntBASIC3.71□□□□□ -1.82
USP38Q8NB14 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP38Q8NB14 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.71□□□□□ -1.82
USP38Q8NB14 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.71□□□□□ -1.82
USP38Q8NB14 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USP38Q8NB14 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP38Q8NB14 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
USP38Q8NB14 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP38Q8NB14 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
USP38Q8NB14 AL138885.1-201ENST00000405921 675 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 MTCO3P41-201ENST00000414801 328 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.7□□□□□ -1.82
USP38Q8NB14 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.7□□□□□ -1.82
USP38Q8NB14 AC137499.1-201ENST00000427602 88 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.7□□□□□ -1.82
USP38Q8NB14 USP9YP14-201ENST00000430663 563 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 USP12PX-201ENST00000432383 1057 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.7□□□□□ -1.82
USP38Q8NB14 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.7□□□□□ -1.82
USP38Q8NB14 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.7□□□□□ -1.82
USP38Q8NB14 MTND1P12-201ENST00000455231 147 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.7□□□□□ -1.82
USP38Q8NB14 TPT1P7-201ENST00000458300 517 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 RN7SL442P-201ENST00000473804 320 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 AC012181.1-201ENST00000479895 423 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP38Q8NB14 YWHAEP4-201ENST00000505390 198 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 Vault.3-201ENST00000516676 95 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP38Q8NB14 AC011979.2-201ENST00000527568 352 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.7□□□□□ -1.82
USP38Q8NB14 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.7□□□□□ -1.82
USP38Q8NB14 AC128657.1-201ENST00000549459 145 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.7□□□□□ -1.82
USP38Q8NB14 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.7□□□□□ -1.82
USP38Q8NB14 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.7□□□□□ -1.82
USP38Q8NB14 MIR3162-201ENST00000581818 82 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 MIR4293-201ENST00000584305 78 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 AC079089.3-201ENST00000603094 673 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 AC072046.2-201ENST00000618366 268 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 LRRC77P-213ENST00000637727 880 ntBASIC3.7□□□□□ -1.82
USP38Q8NB14 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.7□□□□□ -1.82
USP38Q8NB14 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP38Q8NB14 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.7□□□□□ -1.82
USP38Q8NB14 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP38Q8NB14 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.7□□□□□ -1.82
USP38Q8NB14 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.7□□□□□ -1.82
USP38Q8NB14 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP38Q8NB14 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.69□□□□□ -1.82
USP38Q8NB14 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
USP38Q8NB14 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP38Q8NB14 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
USP38Q8NB14 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP38Q8NB14 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.69□□□□□ -1.82
USP38Q8NB14 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP38Q8NB14 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP38Q8NB14 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 MIR1290-201ENST00000408735 78 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 RN7SKP140-201ENST00000411196 284 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.69□□□□□ -1.82
USP38Q8NB14 AC063979.1-201ENST00000415539 377 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.69□□□□□ -1.82
USP38Q8NB14 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.69□□□□□ -1.82
USP38Q8NB14 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.69□□□□□ -1.82
USP38Q8NB14 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.69□□□□□ -1.82
USP38Q8NB14 AC140076.1-201ENST00000449897 361 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.69□□□□□ -1.82
USP38Q8NB14 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.69□□□□□ -1.82
USP38Q8NB14 RPS20P20-201ENST00000460498 340 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 AC091435.1-201ENST00000505442 584 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.69□□□□□ -1.82
USP38Q8NB14 AC010265.1-201ENST00000513509 211 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 RNA5SP356-201ENST00000515972 94 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 RNU1-61P-201ENST00000516107 151 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 RNU6-1256P-201ENST00000516539 103 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 SNORA70.19-201ENST00000516717 90 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP38Q8NB14 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.69□□□□□ -1.82
USP38Q8NB14 AC004024.1-201ENST00000549244 247 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.69□□□□□ -1.82
USP38Q8NB14 AGGF1P4-201ENST00000568249 801 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 NRBF2P1-201ENST00000587407 859 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 AC091805.2-201ENST00000603848 235 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 AC091834.1-201ENST00000614543 472 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 AC099842.1-201ENST00000619919 596 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 MIR7153-201ENST00000637758 57 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.69□□□□□ -1.82
USP38Q8NB14 AL513302.2-201ENST00000562313 1842 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.69□□□□□ -1.82
USP38Q8NB14 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP38Q8NB14 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP38Q8NB14 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP38Q8NB14 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP38Q8NB14 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.68□□□□□ -1.82
USP38Q8NB14 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
USP38Q8NB14 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms