Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 Y_RNA.46-201ENST00000362695 102 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 RNY4P24-201ENST00000362735 96 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 RNU6-553P-201ENST00000364047 96 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 Y_RNA.560-201ENST00000384689 102 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 MIR483-201ENST00000385070 76 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 RPS20P2-201ENST00000402520 389 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AL356057.2-201ENST00000403318 432 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SKA3Q8IX90 RN7SKP140-201ENST00000411196 284 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 Z85995.1-201ENST00000415547 335 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 AL451054.2-201ENST00000420896 202 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 MTND4P20-201ENST00000424125 869 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC007919.1-201ENST00000429380 217 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AL365184.2-201ENST00000431139 435 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC005094.1-201ENST00000440420 368 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 AL135938.1-201ENST00000443141 297 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 CBWD4P-201ENST00000445695 655 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC009961.3-201ENST00000449832 765 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AL133217.1-201ENST00000450980 425 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 SNRPGP6-201ENST00000451124 220 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 RPL30P6-201ENST00000475925 342 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 HIGD1AP13-201ENST00000509878 289 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC091826.1-201ENST00000514065 313 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 RNU6-390P-201ENST00000516259 103 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 AP002748.2-201ENST00000528671 348 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC091489.2-201ENST00000566263 604 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AL356432.3-201ENST00000568952 465 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SKA3Q8IX90 MIR3609-201ENST00000582661 80 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 GLUD1P4-201ENST00000590914 418 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC002545.1-201ENST00000592511 181 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 NIFKP6-201ENST00000598115 845 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC019159.1-201ENST00000605094 187 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC108747.1-201ENST00000609508 535 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC135507.2-201ENST00000612443 309 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 AF246928.1-201ENST00000623768 87 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC120349.3-201ENST00000624377 529 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC093591.3-201ENST00000634516 308 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SKA3Q8IX90 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
SKA3Q8IX90 AL445523.1-201ENST00000451184 1362 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 AC007785.2-201ENST00000598627 1916 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SKA3Q8IX90 PABPC1P9-201ENST00000426076 1612 ntBASIC2.46□□□□□ -2.02
SKA3Q8IX90 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SKA3Q8IX90 Y_RNA.169-201ENST00000363745 96 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.45□□□□□ -2.02
SKA3Q8IX90 SPA17P1-201ENST00000416656 452 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 USP9YP26-201ENST00000421008 661 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.45□□□□□ -2.02
SKA3Q8IX90 AC092447.3-201ENST00000426027 686 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.45□□□□□ -2.02
SKA3Q8IX90 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 PIGFP3-201ENST00000441918 722 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 AC118469.1-201ENST00000442943 488 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 AC010099.1-201ENST00000455434 375 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 AC003982.1-202ENST00000469928 248 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.45□□□□□ -2.02
SKA3Q8IX90 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.45□□□□□ -2.02
SKA3Q8IX90 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.45□□□□□ -2.02
SKA3Q8IX90 AC009901.1-201ENST00000506703 541 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 CDC42P4-201ENST00000510507 563 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 MTND1P22-201ENST00000510572 951 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 OR5BM1P-201ENST00000512021 366 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 RNU6-928P-201ENST00000516876 104 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 RNU6-64P-201ENST00000517119 105 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 MTND4LP18-201ENST00000526864 291 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 DEFB108A-201ENST00000530110 222 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 AC123904.3-201ENST00000547218 814 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.45□□□□□ -2.02
SKA3Q8IX90 ACTR3BP3-201ENST00000565577 979 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.45□□□□□ -2.02
SKA3Q8IX90 ZNF861P-201ENST00000588126 639 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 RPL12P50-201ENST00000603116 116 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 AL138880.2-201ENST00000616214 239 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 AC073308.1-201ENST00000623696 305 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 246.4 ms