Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC005296.1-201ENST00000616145 209 ntBASIC1.67□□□□□ -2.14
LRRC28Q86X40 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.67□□□□□ -2.14
LRRC28Q86X40 AC073308.1-201ENST00000623696 305 ntBASIC1.67□□□□□ -2.14
LRRC28Q86X40 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.67□□□□□ -2.14
LRRC28Q86X40 AL163152.1-201ENST00000642001 374 ntBASIC1.67□□□□□ -2.14
LRRC28Q86X40 AP006437.1-201ENST00000641440 3685 ntBASIC1.67□□□□□ -2.14
LRRC28Q86X40 AC011477.1-204ENST00000623416 1325 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LRRC28Q86X40 U6.112-201ENST00000384129 70 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 MIR506-201ENST00000384998 124 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 MIR504-201ENST00000385065 83 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LRRC28Q86X40 PTGES3P2-201ENST00000407942 482 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 RNU2-43P-201ENST00000410306 190 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 RNU2-28P-201ENST00000410457 189 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 SNORD56-201ENST00000413522 71 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.66□□□□□ -2.14
LRRC28Q86X40 MTCO3P1-205ENST00000422088 832 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 NDUFB4P7-201ENST00000423198 363 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.66□□□□□ -2.14
LRRC28Q86X40 TAAR7P-201ENST00000436141 242 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 Z80107.1-201ENST00000436830 412 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 ATG12P2-201ENST00000456830 416 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 RNU7-23P-201ENST00000459465 62 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 AC104164.3-201ENST00000467363 1258 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 RPL23AP42-201ENST00000471152 471 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 AC055731.1-201ENST00000474387 401 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 TRBV1-201ENST00000476502 284 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 AC013828.1-201ENST00000481845 158 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 COX7A2P2-201ENST00000505291 250 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 AC112518.2-201ENST00000508565 425 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 AC093281.2-201ENST00000510153 597 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LRRC28Q86X40 AC027338.1-201ENST00000514840 825 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 RNA5SP182-201ENST00000516064 82 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.66□□□□□ -2.14
LRRC28Q86X40 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.66□□□□□ -2.14
LRRC28Q86X40 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.66□□□□□ -2.14
LRRC28Q86X40 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.66□□□□□ -2.14
LRRC28Q86X40 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LRRC28Q86X40 AC125611.1-201ENST00000549563 229 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 OR4K8P-201ENST00000578842 1048 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LRRC28Q86X40 NRBF2P1-201ENST00000587407 859 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.66□□□□□ -2.14
LRRC28Q86X40 AC013553.2-201ENST00000604244 589 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 AP003973.1-201ENST00000604639 691 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 YWHAEP7-203ENST00000622054 312 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 U6.101-201ENST00000637707 76 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 MTND4P27-201ENST00000450813 1354 ntBASIC1.66□□□□□ -2.14
LRRC28Q86X40 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LRRC28Q86X40 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
LRRC28Q86X40 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.65□□□□□ -2.15
LRRC28Q86X40 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
LRRC28Q86X40 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LRRC28Q86X40 U8.14-201ENST00000390843 143 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 TMSB4XP8-201ENST00000402089 135 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 AL450338.1-201ENST00000407987 512 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 RNU6-1140P-201ENST00000410517 106 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.65□□□□□ -2.15
LRRC28Q86X40 TMSB4XP6-201ENST00000415187 135 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 EIF1AXP1-201ENST00000419267 435 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 FAM204CP-201ENST00000424489 642 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 TMSB4XP1-201ENST00000424567 135 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.65□□□□□ -2.15
LRRC28Q86X40 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.65□□□□□ -2.15
LRRC28Q86X40 MRPL42P4-201ENST00000453267 443 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 SUMO2P2-201ENST00000456482 255 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 RPL21P99-201ENST00000480369 423 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 AC026801.1-201ENST00000497178 464 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 AC022483.1-201ENST00000514020 567 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 SNORA31.23-201ENST00000517219 133 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.65□□□□□ -2.15
LRRC28Q86X40 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.65□□□□□ -2.15
LRRC28Q86X40 BNIP3P24-201ENST00000593398 557 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 AC098483.2-201ENST00000603158 454 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.65□□□□□ -2.15
LRRC28Q86X40 TUG1_1.1-201ENST00000610654 145 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 AC009318.2-201ENST00000610917 651 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 AC006213.4-201ENST00000616184 634 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.65□□□□□ -2.15
LRRC28Q86X40 AC093875.1-201ENST00000623688 504 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 PISRT1-201ENST00000626175 531 ntBASIC1.65□□□□□ -2.15
LRRC28Q86X40 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.65□□□□□ -2.15
LRRC28Q86X40 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.64□□□□□ -2.15
LRRC28Q86X40 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LRRC28Q86X40 RNU6-492P-201ENST00000363035 104 ntBASIC1.64□□□□□ -2.15
LRRC28Q86X40 RNU6-468P-201ENST00000384003 109 ntBASIC1.64□□□□□ -2.15
LRRC28Q86X40 Y_RNA.548-201ENST00000384656 105 ntBASIC1.64□□□□□ -2.15
LRRC28Q86X40 AL035405.1-201ENST00000400795 710 ntBASIC1.64□□□□□ -2.15
LRRC28Q86X40 AL355615.1-201ENST00000406187 641 ntBASIC1.64□□□□□ -2.15
LRRC28Q86X40 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.64□□□□□ -2.15
LRRC28Q86X40 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.64□□□□□ -2.15
LRRC28Q86X40 UBE2D3P3-201ENST00000426992 425 ntBASIC1.64□□□□□ -2.15
LRRC28Q86X40 TOMM20P4-201ENST00000427861 435 ntBASIC1.64□□□□□ -2.15
LRRC28Q86X40 MTND2P5-201ENST00000432656 1006 ntBASIC1.64□□□□□ -2.15
LRRC28Q86X40 MTCYBP15-201ENST00000433123 1127 ntBASIC1.64□□□□□ -2.15
LRRC28Q86X40 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.64□□□□□ -2.15
LRRC28Q86X40 VN1R10P-201ENST00000447106 875 ntBASIC1.64□□□□□ -2.15
LRRC28Q86X40 TPT1P14-201ENST00000448018 505 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms