Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 NEK4P1-201ENST00000433383 879 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 GTF2IP13-201ENST00000438487 386 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 HMGB3P11-201ENST00000440127 604 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 PRPS1P1-201ENST00000445305 876 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 FABP5P15-201ENST00000453566 214 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 RPS29P33-201ENST00000456717 146 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 RPL23AP14-201ENST00000468281 468 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC006463.2-201ENST00000473326 348 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 RPL12P20-201ENST00000475538 479 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC139453.3-201ENST00000493276 369 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 RPL30P5-201ENST00000494923 336 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 HMGN1P12-201ENST00000499125 195 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC091951.2-201ENST00000500762 203 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 SCARNA22-201ENST00000503991 125 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC091885.1-201ENST00000506658 268 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC026784.1-201ENST00000507986 352 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 RNA5SP165-201ENST00000517142 115 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC107953.1-201ENST00000522216 297 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 MIR4474-201ENST00000579189 78 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC012119.1-201ENST00000603184 222 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC004805.2-201ENST00000605382 482 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC093913.1-201ENST00000614178 329 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 MIR6780A-201ENST00000615089 68 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 Y_RNA.804-201ENST00000615262 101 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC063943.3-201ENST00000615562 356 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AC005858.4-201ENST00000623191 700 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AL773545.4-201ENST00000637262 310 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 AL513478.4-201ENST00000641636 310 ntBASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM88Q6PEY1 MTND4P12-201ENST00000498999 1377 ntBASIC3.34□□□□□ -1.88
TMEM88Q6PEY1 AC118273.1-201ENST00000525324 3006 ntBASIC3.34□□□□□ -1.88
TMEM88Q6PEY1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TMEM88Q6PEY1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TMEM88Q6PEY1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TMEM88Q6PEY1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
TMEM88Q6PEY1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AL049641.1-201ENST00000441055 1948 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 RNA5SP505-201ENST00000364748 108 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AL583835.1-201ENST00000399570 407 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 RPS20P14-201ENST00000412545 360 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AL591848.1-201ENST00000413092 322 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 BX682237.1-201ENST00000415016 335 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC009161.1-201ENST00000417306 376 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AL591704.1-201ENST00000432574 275 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 RPL12P25-201ENST00000455592 494 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC007547.1-201ENST00000462177 490 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC010326.1-201ENST00000462726 602 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC012181.1-201ENST00000479895 423 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AL049830.2-201ENST00000480072 201 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 RNU6-1314P-201ENST00000517139 104 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 RNU6-1315P-201ENST00000517187 99 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC022690.1-201ENST00000526681 550 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC136601.2-201ENST00000604356 474 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 CTHRC1P1-201ENST00000605383 469 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC009994.1-201ENST00000606889 253 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC104260.1-201ENST00000616660 539 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 MIR7702-201ENST00000621931 59 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC092628.2-201ENST00000622492 339 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AP000346.3-201ENST00000622821 210 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AC027309.3-201ENST00000623419 351 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 AP003122.6-201ENST00000623831 495 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 ZFRP1-201ENST00000457579 2970 ntBASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TMEM88Q6PEY1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM88Q6PEY1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM88Q6PEY1 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM88Q6PEY1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM88Q6PEY1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM88Q6PEY1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM88Q6PEY1 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM88Q6PEY1 AC021146.4-201ENST00000309229 279 ntBASIC3.32□□□□□ -1.88
TMEM88Q6PEY1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM88Q6PEY1 RNU6-1252P-201ENST00000363054 104 ntBASIC3.32□□□□□ -1.88
TMEM88Q6PEY1 RNA5SP443-201ENST00000363083 132 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms