Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MTND1P18-201ENST00000448191 573 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 RPS4XP10-201ENST00000465034 731 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AL049714.1-201ENST00000466686 347 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AC006512.1-201ENST00000468816 291 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AC087385.1-201ENST00000475062 312 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AC004062.1-201ENST00000509926 645 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 MTCO3P44-201ENST00000510977 541 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AC114797.1-201ENST00000514003 728 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 RNU4-49P-201ENST00000516080 140 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AP005597.4-201ENST00000526762 229 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 PSMA3P-201ENST00000555485 635 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 TGIF1P1-201ENST00000558095 802 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AC002550.2-201ENST00000621246 394 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AL359893.1-201ENST00000447628 1580 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 Y_RNA.132-201ENST00000363421 102 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 Y_RNA.162-201ENST00000363683 102 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 Y_RNA.231-201ENST00000364358 102 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 U3.11-201ENST00000364476 212 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 RNU6-522P-201ENST00000364497 107 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 SNORA32.2-201ENST00000384049 122 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 MIR554-201ENST00000384874 96 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 RNU6-510P-201ENST00000391239 108 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 RPS12P23-201ENST00000419579 400 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 RPL7L1P10-201ENST00000427790 463 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 CYCSP4-201ENST00000429682 331 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AC018644.1-201ENST00000429934 551 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 HMGB1P18-201ENST00000438801 619 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 RPS4XP2-201ENST00000458402 793 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 RPL7L1P8-201ENST00000469911 741 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 RPL21P103-201ENST00000479921 488 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 COX7A2P2-201ENST00000505291 250 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AC092436.1-201ENST00000506450 503 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AC104619.4-201ENST00000510773 249 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 TTC39CP1-201ENST00000512513 755 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AC017037.2-201ENST00000513850 890 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AC105417.1-201ENST00000514691 285 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 RN7SKP13-201ENST00000515933 244 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 Y_RNA.665-201ENST00000516177 98 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 MIR2276-201ENST00000516886 89 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AC023632.4-201ENST00000517783 191 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AC034105.4-201ENST00000568304 277 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 MIR4775-201ENST00000581168 75 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 MIR4424-201ENST00000585257 86 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AC006116.10-201ENST00000591836 581 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AC113139.1-201ENST00000605049 239 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AL133255.1-201ENST00000606374 441 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AL365204.3-201ENST00000612448 685 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 uc_338.32-201ENST00000615087 172 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AL590099.1-201ENST00000615276 138 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 AL133216.2-202ENST00000634512 349 ntBASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ZNF549Q6P9A3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 MFSD8-233ENST00000641482 4860 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AC058791.1-201ENST00000608412 3198 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 RN7SKP44-201ENST00000363602 316 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 U3.12-201ENST00000364498 214 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 RNU6-38P-201ENST00000384085 107 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 SNORA5A-201ENST00000384111 134 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 RNU6-831P-201ENST00000384548 107 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms