Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC012435.1-202ENST00000568772 240 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC58Q4VC31 MIR4713-201ENST00000582691 75 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 AC103810.8-201ENST00000607347 118 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 AC021851.1-201ENST00000608537 1082 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC58Q4VC31 AC092608.3-201ENST00000625017 386 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 RNU1-62P-201ENST00000362599 164 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 SNORA40.18-201ENST00000391200 128 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 RNA5SP212-201ENST00000391223 107 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AC096649.2-201ENST00000416186 393 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 RPP40P1-201ENST00000426762 456 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AL096803.2-201ENST00000450032 677 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AC104564.1-201ENST00000493028 407 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 FAM206BP-201ENST00000510179 541 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AC010486.1-201ENST00000511793 424 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AC107953.1-201ENST00000522216 297 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AC074051.3-201ENST00000570238 358 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AP001269.3-201ENST00000588718 329 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AC016925.2-201ENST00000605108 242 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AC016542.1-201ENST00000608259 493 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AC093673.2-201ENST00000609674 331 ntBASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.37□□□□□ -2.19
CCDC58Q4VC31 AC007785.2-201ENST00000598627 1916 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CCDC58Q4VC31 RNA5SP27-201ENST00000363839 119 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 SNORD51-201ENST00000384320 80 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 BTF3L4P2-201ENST00000392798 346 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 AC244453.4-201ENST00000419150 388 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 AC246680.2-201ENST00000422106 389 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 AC244035.1-201ENST00000430042 390 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC58Q4VC31 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC58Q4VC31 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
CCDC58Q4VC31 RPS27P23-201ENST00000487608 251 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 MTCYBP35-201ENST00000503630 1137 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
CCDC58Q4VC31 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.36□□□□□ -2.19
CCDC58Q4VC31 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC58Q4VC31 ATP5F1P7-201ENST00000567330 760 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 AC022254.1-201ENST00000567857 235 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 MIR3198-2-201ENST00000577868 80 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 AC080013.4-201ENST00000607624 649 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 AL356585.4-201ENST00000623078 1229 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 PISRT1-201ENST00000626175 531 ntBASIC1.36□□□□□ -2.19
CCDC58Q4VC31 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
CCDC58Q4VC31 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CCDC58Q4VC31 CDC27P3-201ENST00000635418 1910 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 RNU1-42P-201ENST00000364033 160 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 RSL24D1P4-201ENST00000400938 484 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 U6atac.2-201ENST00000408644 118 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC58Q4VC31 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.35□□□□□ -2.19
CCDC58Q4VC31 AL606490.8-201ENST00000441624 319 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 USP9YP10-201ENST00000454868 628 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 AMD1P1-201ENST00000457220 922 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC58Q4VC31 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC58Q4VC31 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.35□□□□□ -2.19
CCDC58Q4VC31 HMGB1P35-201ENST00000503360 598 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 Y_RNA.675-201ENST00000516389 149 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 RNU1-103P-201ENST00000516502 125 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 AP005597.4-201ENST00000526762 229 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC58Q4VC31 LSM6P2-201ENST00000552208 177 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC58Q4VC31 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC58Q4VC31 AC018618.2-201ENST00000604770 446 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 BNIP3P4-201ENST00000604946 565 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 BX248123.2-201ENST00000606318 124 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 FRG1HP-204ENST00000617940 757 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 AC008443.7-201ENST00000622195 246 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 AC006026.1-201ENST00000444025 1803 ntBASIC1.35□□□□□ -2.19
CCDC58Q4VC31 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.35□□□□□ -2.19
CCDC58Q4VC31 MIR449A-201ENST00000362113 91 ntBASIC1.34□□□□□ -2.19
CCDC58Q4VC31 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC58Q4VC31 AL358453.1-201ENST00000422522 250 ntBASIC1.34□□□□□ -2.19
CCDC58Q4VC31 VN1R108P-201ENST00000431580 830 ntBASIC1.34□□□□□ -2.19
CCDC58Q4VC31 MTND1P33-201ENST00000446251 917 ntBASIC1.34□□□□□ -2.19
CCDC58Q4VC31 HMGN2P10-201ENST00000448085 265 ntBASIC1.34□□□□□ -2.19
CCDC58Q4VC31 HIGD1AP6-201ENST00000521833 279 ntBASIC1.34□□□□□ -2.19
CCDC58Q4VC31 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC58Q4VC31 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms