Protein–RNA interactions for Protein: Q15386

UBE3C, Ubiquitin-protein ligase E3C, humanhuman

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3CQ15386 MIR514A3-201ENST00000385132 88 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 MIR670-201ENST00000390142 98 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 RN7SKP53-201ENST00000411337 315 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.28□□□□□ -1.72
UBE3CQ15386 RPL21P24-201ENST00000413752 448 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 RPS7P15-201ENST00000415804 584 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 UBE2FP1-201ENST00000416536 447 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 AL137014.1-201ENST00000420490 1226 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 AC006989.1-201ENST00000427212 131 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 IFNA20P-201ENST00000436840 528 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 RPS27AP1-201ENST00000475545 471 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.28□□□□□ -1.72
UBE3CQ15386 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.28□□□□□ -1.72
UBE3CQ15386 AC112206.3-201ENST00000514578 389 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 RNU6-1314P-201ENST00000517139 104 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 BTF3P12-201ENST00000519620 469 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 AC107953.1-201ENST00000522216 297 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.28□□□□□ -1.72
UBE3CQ15386 AC087241.2-201ENST00000535801 324 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3CQ15386 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3CQ15386 AC011611.1-201ENST00000552179 197 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 AC078814.3-201ENST00000553036 491 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 PSMA3P-201ENST00000555485 635 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.28□□□□□ -1.72
UBE3CQ15386 AC243960.4-201ENST00000600532 288 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 AC012669.1-201ENST00000603209 283 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 AC012443.1-201ENST00000605605 231 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 HMGN2P28-201ENST00000606102 262 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 MIR7851-201ENST00000610611 160 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.28□□□□□ -1.72
UBE3CQ15386 MIR6130-201ENST00000619419 109 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 AC005858.4-201ENST00000623191 700 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 U6.114-201ENST00000636407 96 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3CQ15386 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3CQ15386 DDX10P1-201ENST00000448545 1933 ntBASIC4.28□□□□□ -1.72
UBE3CQ15386 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3CQ15386 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UBE3CQ15386 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
UBE3CQ15386 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
UBE3CQ15386 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.27□□□□□ -1.73
UBE3CQ15386 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.27□□□□□ -1.73
UBE3CQ15386 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UBE3CQ15386 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UBE3CQ15386 RNU6-1249P-201ENST00000363237 111 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 SNORA51.2-201ENST00000364595 132 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 RNU6-116P-201ENST00000384042 109 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 RNU6-38P-201ENST00000384085 107 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 MIR218-2-201ENST00000385006 110 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
UBE3CQ15386 AL122016.1-201ENST00000403365 367 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 AL606923.1-201ENST00000406616 190 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 RNA5SP239-201ENST00000410218 129 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 RN7SKP177-201ENST00000410567 355 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 Y_RNA.615-201ENST00000410769 117 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 RNU6-1148P-201ENST00000410992 104 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 MTND3P8-201ENST00000412909 339 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 AC114491.1-201ENST00000416095 246 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.27□□□□□ -1.73
UBE3CQ15386 AC068533.1-201ENST00000418542 415 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 AL353678.1-201ENST00000422735 741 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.27□□□□□ -1.73
UBE3CQ15386 USP9YP7-201ENST00000436723 430 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.27□□□□□ -1.73
UBE3CQ15386 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.27□□□□□ -1.73
UBE3CQ15386 USP9YP32-201ENST00000452432 430 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 ANP32BP2-201ENST00000454525 545 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 RNU6-333P-201ENST00000459117 107 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 AC007547.1-201ENST00000462177 490 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 RPL23AP11-201ENST00000475260 469 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 AP000926.1-201ENST00000479573 241 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 RNU6-1092P-201ENST00000516955 87 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 RNA5SP503-201ENST00000517047 117 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 AC105029.1-201ENST00000520250 669 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.27□□□□□ -1.73
UBE3CQ15386 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.27□□□□□ -1.73
UBE3CQ15386 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.27□□□□□ -1.73
UBE3CQ15386 AC024619.4-201ENST00000580924 316 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.27□□□□□ -1.73
UBE3CQ15386 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.27□□□□□ -1.73
UBE3CQ15386 uc_338.5-201ENST00000611839 155 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 AC135507.2-201ENST00000612443 309 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 TUG1_2.1-201ENST00000614234 87 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 SNHG22-203ENST00000617833 660 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UBE3CQ15386 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UBE3CQ15386 TAB3P1-202ENST00000452645 1634 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.27□□□□□ -1.73
UBE3CQ15386 EXOC5P1-201ENST00000510543 1969 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.27□□□□□ -1.73
UBE3CQ15386 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
UBE3CQ15386 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
UBE3CQ15386 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
UBE3CQ15386 GABPAP-201ENST00000419271 1356 ntBASIC4.27□□□□□ -1.73
UBE3CQ15386 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
UBE3CQ15386 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
UBE3CQ15386 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UBE3CQ15386 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms