Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.44□□□□□ -2.02
RAB40BQ12829 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.44□□□□□ -2.02
RAB40BQ12829 Y_RNA.97-201ENST00000363094 102 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 RNU6-884P-201ENST00000363889 107 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 RNU1-100P-201ENST00000365255 165 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 MIR491-201ENST00000384877 84 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.44□□□□□ -2.02
RAB40BQ12829 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.44□□□□□ -2.02
RAB40BQ12829 GTF2IP20-201ENST00000431663 360 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AC109583.1-201ENST00000432156 268 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 FCF1P1-201ENST00000432690 571 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.44□□□□□ -2.02
RAB40BQ12829 RPL23AP83-201ENST00000434984 473 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 TIMM9P1-201ENST00000436122 256 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 MTCYBP39-201ENST00000437562 491 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.44□□□□□ -2.02
RAB40BQ12829 AC009296.1-201ENST00000443146 155 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.44□□□□□ -2.02
RAB40BQ12829 Z96811.1-201ENST00000445880 108 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AL590639.1-201ENST00000456484 337 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 RPL26P9-201ENST00000457466 433 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 MRPS17P3-201ENST00000465453 385 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RAB40BQ12829 SRIP1-201ENST00000489235 288 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AC006445.1-201ENST00000491925 405 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.44□□□□□ -2.02
RAB40BQ12829 AC098799.2-201ENST00000509466 868 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.44□□□□□ -2.02
RAB40BQ12829 RN7SKP287-201ENST00000516546 266 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 RN7SKP258-201ENST00000517151 304 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 RN7SKP57-201ENST00000517248 293 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AC009812.2-201ENST00000517657 457 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.44□□□□□ -2.02
RAB40BQ12829 AC090136.1-201ENST00000520009 240 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.44□□□□□ -2.02
RAB40BQ12829 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.44□□□□□ -2.02
RAB40BQ12829 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.44□□□□□ -2.02
RAB40BQ12829 H3F3AP1-201ENST00000559984 334 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.44□□□□□ -2.02
RAB40BQ12829 AL355877.2-201ENST00000603670 358 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AC093424.1-201ENST00000604999 338 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AC131902.3-201ENST00000611767 581 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AC008498.1-201ENST00000613012 531 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.44□□□□□ -2.02
RAB40BQ12829 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 MIR8057-201ENST00000620957 69 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.44□□□□□ -2.02
RAB40BQ12829 AC092192.1-201ENST00000633154 1018 ntBASIC2.44□□□□□ -2.02
RAB40BQ12829 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
RAB40BQ12829 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.44□□□□□ -2.02
RAB40BQ12829 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
RAB40BQ12829 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.44□□□□□ -2.02
RAB40BQ12829 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
RAB40BQ12829 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
RAB40BQ12829 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
RAB40BQ12829 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
RAB40BQ12829 ZNF519P1-201ENST00000449011 1626 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 AC000403.1-201ENST00000613696 3585 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
RAB40BQ12829 MIR6073-201ENST00000352083 89 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 RNU6-1167P-201ENST00000363227 94 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 RNU6-1284P-201ENST00000363701 100 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 RNU6-809P-201ENST00000384461 107 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 MIR888-201ENST00000401186 77 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 RNA5SP492-201ENST00000411330 114 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 USP9YP13-201ENST00000417797 480 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.43□□□□□ -2.02
RAB40BQ12829 AL512649.1-201ENST00000428997 581 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.43□□□□□ -2.02
RAB40BQ12829 RPL37P21-201ENST00000435890 276 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 SNRPEP9-201ENST00000436794 238 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.43□□□□□ -2.02
RAB40BQ12829 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.43□□□□□ -2.02
RAB40BQ12829 GDI2P2-201ENST00000445131 608 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 RPL37P6-201ENST00000460682 294 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
RAB40BQ12829 AC126182.1-201ENST00000478134 357 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 RPL36AP51-201ENST00000487216 318 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 RPS29P20-201ENST00000489592 171 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 RN7SL504P-201ENST00000494496 287 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.43□□□□□ -2.02
RAB40BQ12829 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.43□□□□□ -2.02
RAB40BQ12829 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.43□□□□□ -2.02
RAB40BQ12829 RNU6-1003P-201ENST00000517099 105 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.43□□□□□ -2.02
RAB40BQ12829 AC022634.1-201ENST00000520765 532 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.43□□□□□ -2.02
RAB40BQ12829 AC010546.1-201ENST00000569391 485 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.43□□□□□ -2.02
RAB40BQ12829 AC005498.1-201ENST00000592125 465 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 AC012493.2-201ENST00000595083 291 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 AC008751.2-201ENST00000597885 980 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 AP000787.2-201ENST00000604432 568 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 AL356266.1-201ENST00000623311 483 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 AC010297.1-201ENST00000623948 149 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.43□□□□□ -2.02
RAB40BQ12829 AC138915.1-201ENST00000565427 1685 ntBASIC2.43□□□□□ -2.02
RAB40BQ12829 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.42□□□□□ -2.02
RAB40BQ12829 RPS20P2-201ENST00000402520 389 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 AL513477.1-202ENST00000417061 214 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms