Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SCN1BQ07699 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.87□□□□□ -1.95
SCN1BQ07699 AL049781.1-201ENST00000623195 3585 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SCN1BQ07699 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
SCN1BQ07699 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SCN1BQ07699 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SCN1BQ07699 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SCN1BQ07699 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SCN1BQ07699 RNA5SP124-201ENST00000362739 110 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 SET-203ENST00000372688 801 ntTSL 2 BASIC2.86□□□□□ -1.95
SCN1BQ07699 MIR627-201ENST00000384979 97 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 MIR218-2-201ENST00000385006 110 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 RNU6-750P-201ENST00000390946 107 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 RPL21P75-201ENST00000396599 483 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 RPL21P28-201ENST00000401418 483 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AL592114.1-201ENST00000403842 483 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 RPL5P18-201ENST00000406671 891 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 RAB9AP3-201ENST00000412737 573 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 RPS15AP7-201ENST00000439294 405 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AC098831.1-201ENST00000440661 216 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 COX6CP2-201ENST00000444980 225 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 RAB9AP1-201ENST00000449393 573 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 RPL21P39-201ENST00000463605 483 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SCN1BQ07699 RPL21P93-201ENST00000480465 489 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AC087190.1-201ENST00000484462 480 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 RPL39P36-201ENST00000490784 156 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AC093591.1-201ENST00000491435 481 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 RPL21P129-201ENST00000491732 478 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 RPL21P16-201ENST00000495531 483 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AC010486.2-201ENST00000505572 483 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 HSPD1P15-201ENST00000505573 1122 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 FABP5P5-201ENST00000515537 406 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 RNU7-51P-201ENST00000516560 62 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 TRMT10BP1-201ENST00000519377 943 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.86□□□□□ -1.95
SCN1BQ07699 DUXAP5-201ENST00000529668 529 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AC022878.1-201ENST00000530684 149 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN1BQ07699 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN1BQ07699 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.86□□□□□ -1.95
SCN1BQ07699 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.86□□□□□ -1.95
SCN1BQ07699 AC015917.1-201ENST00000579654 510 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 BNIP3P9-201ENST00000603714 553 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AC012360.2-201ENST00000609349 391 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AC069234.5-201ENST00000611056 416 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 uc_338.1-201ENST00000612113 180 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AL365204.3-201ENST00000612448 685 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AC011939.3-201ENST00000613686 466 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AC130324.3-201ENST00000614165 542 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AC007998.5-201ENST00000622938 237 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 AL512643.1-201ENST00000635735 524 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 MIR3199-2-201ENST00000636243 86 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 Z99571.1-201ENST00000636677 394 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 MIR7515-201ENST00000637837 67 ntBASIC2.86□□□□□ -1.95
SCN1BQ07699 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SCN1BQ07699 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.85□□□□□ -1.95
SCN1BQ07699 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SCN1BQ07699 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SCN1BQ07699 RNU5E-1-201ENST00000362477 120 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 RNU4-1-201ENST00000363925 141 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN1BQ07699 RNU6-190P-201ENST00000384154 102 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN1BQ07699 AL589872.1-201ENST00000426602 288 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.85□□□□□ -1.95
SCN1BQ07699 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN1BQ07699 AL591212.2-201ENST00000433923 257 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN1BQ07699 AL513043.1-201ENST00000439124 535 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.85□□□□□ -1.95
SCN1BQ07699 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN1BQ07699 AC107626.1-201ENST00000471084 183 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 AC128713.1-201ENST00000471495 306 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 NDUFB4P2-201ENST00000509515 391 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 FCF1P8-201ENST00000510322 597 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 RNU6-677P-201ENST00000516914 101 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 RNU6-143P-201ENST00000516942 93 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.85□□□□□ -1.95
SCN1BQ07699 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN1BQ07699 NACAP3-201ENST00000552100 481 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 RPL21P5-201ENST00000554662 472 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
SCN1BQ07699 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.85□□□□□ -1.95
SCN1BQ07699 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN1BQ07699 AC245389.1-201ENST00000605141 529 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 AC026790.2-201ENST00000606282 430 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.85□□□□□ -1.95
SCN1BQ07699 AC009093.8-201ENST00000641769 292 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 ADAM3A-203ENST00000461344 2157 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 MTND4P35-201ENST00000604257 1375 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SCN1BQ07699 AC010889.1-201ENST00000566193 2666 ntBASIC2.85□□□□□ -1.95
SCN1BQ07699 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN1BQ07699 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SCN1BQ07699 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.84□□□□□ -1.95
SCN1BQ07699 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms