Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.95□□□□□ -1.94
GABPAQ06546 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.95□□□□□ -1.94
GABPAQ06546 AF038458.1-201ENST00000588406 262 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 TPMTP1-201ENST00000592307 737 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 AC112187.2-201ENST00000604345 283 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 AC093838.1-201ENST00000613014 469 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.95□□□□□ -1.94
GABPAQ06546 AC025034.2-201ENST00000623264 286 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 AC079416.3-201ENST00000624479 549 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.95□□□□□ -1.94
GABPAQ06546 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
GABPAQ06546 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
GABPAQ06546 AL138713.1-201ENST00000624026 2130 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.94□□□□□ -1.94
GABPAQ06546 AL161431.1-201ENST00000618966 4205 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
GABPAQ06546 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
GABPAQ06546 RNU6-223P-201ENST00000362830 107 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 RNA5SP456-201ENST00000364002 114 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 SNORA1.3-201ENST00000384676 136 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 RNA5SP210-201ENST00000391034 120 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 TXNP7-201ENST00000406296 293 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 SNORD88.1-201ENST00000408684 91 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 VPS26BP1-201ENST00000417155 755 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 RPL7P10-201ENST00000417407 739 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.94□□□□□ -1.94
GABPAQ06546 RPL37P21-201ENST00000435890 276 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.94□□□□□ -1.94
GABPAQ06546 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.94□□□□□ -1.94
GABPAQ06546 AL590664.1-201ENST00000448065 339 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.94□□□□□ -1.94
GABPAQ06546 MTCO1P42-201ENST00000457379 726 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.94□□□□□ -1.94
GABPAQ06546 AL139824.2-201ENST00000458731 1095 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 AC098862.1-201ENST00000504991 413 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 AC008549.1-201ENST00000512900 643 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 SNORD59.2-201ENST00000516873 68 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 CASP1P1-201ENST00000526345 212 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 AP000907.2-201ENST00000530827 353 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.94□□□□□ -1.94
GABPAQ06546 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.94□□□□□ -1.94
GABPAQ06546 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.94□□□□□ -1.94
GABPAQ06546 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.94□□□□□ -1.94
GABPAQ06546 AL158211.1-201ENST00000566763 763 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.94□□□□□ -1.94
GABPAQ06546 AC090616.2-202ENST00000584248 222 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.94□□□□□ -1.94
GABPAQ06546 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.94□□□□□ -1.94
GABPAQ06546 NIFKP6-201ENST00000598115 845 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 AC068790.3-201ENST00000602988 553 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 AC068313.1-201ENST00000604028 1008 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.94□□□□□ -1.94
GABPAQ06546 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 AC012150.2-201ENST00000621300 544 ntBASIC2.94□□□□□ -1.94
GABPAQ06546 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
GABPAQ06546 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.94□□□□□ -1.94
GABPAQ06546 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
GABPAQ06546 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
GABPAQ06546 AC016717.2-201ENST00000609089 5141 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.93□□□□□ -1.94
GABPAQ06546 AC004944.1-201ENST00000517807 3059 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
GABPAQ06546 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
GABPAQ06546 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
GABPAQ06546 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
GABPAQ06546 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
GABPAQ06546 Y_RNA.560-201ENST00000384689 102 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 RNU6-1077P-201ENST00000410506 102 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 RN7SKP123-201ENST00000410732 291 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 RNA5SP38-201ENST00000410750 119 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 AL590383.1-201ENST00000428602 75 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.93□□□□□ -1.94
GABPAQ06546 UBE2D3P1-201ENST00000436669 444 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 AC009237.8-201ENST00000445492 379 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 AL133217.1-201ENST00000450980 425 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.93□□□□□ -1.94
GABPAQ06546 RPS20P20-201ENST00000460498 340 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 RPL23AP11-201ENST00000475260 469 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 AC055855.1-201ENST00000489563 579 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.93□□□□□ -1.94
GABPAQ06546 MRPS33P3-201ENST00000513456 322 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 RNU6-390P-201ENST00000516259 103 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 RNU6-1256P-201ENST00000516539 103 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.93□□□□□ -1.94
GABPAQ06546 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.93□□□□□ -1.94
GABPAQ06546 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.93□□□□□ -1.94
GABPAQ06546 RPL23AP84-201ENST00000571193 464 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 AC005951.2-201ENST00000576282 495 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 AC007038.2-201ENST00000608095 740 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.93□□□□□ -1.94
GABPAQ06546 AC090132.2-201ENST00000615881 347 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 AC027309.3-201ENST00000623419 351 ntBASIC2.93□□□□□ -1.94
GABPAQ06546 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.93□□□□□ -1.94
GABPAQ06546 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
GABPAQ06546 RNU6-500P-201ENST00000362349 107 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 SNORD21-201ENST00000383953 95 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 RPS27AP14-201ENST00000422868 454 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 NDUFB4P7-201ENST00000423198 363 ntBASIC2.92□□□□□ -1.94
GABPAQ06546 AL390023.1-201ENST00000428836 262 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms