Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HOXC5Q00444 AC093155.1-201ENST00000440164 826 ntBASIC1.73□□□□□ -2.13
HOXC5Q00444 AL158053.1-201ENST00000441503 453 ntBASIC1.73□□□□□ -2.13
HOXC5Q00444 OR10R1P-201ENST00000441524 1141 ntBASIC1.73□□□□□ -2.13
HOXC5Q00444 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.73□□□□□ -2.13
HOXC5Q00444 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.73□□□□□ -2.13
HOXC5Q00444 MTCYBP11-201ENST00000447254 1109 ntBASIC1.73□□□□□ -2.13
HOXC5Q00444 PSPHP1-201ENST00000450062 261 ntBASIC1.73□□□□□ -2.13
HOXC5Q00444 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.73□□□□□ -2.13
HOXC5Q00444 PPP1R2P5-201ENST00000457256 603 ntBASIC1.73□□□□□ -2.13
HOXC5Q00444 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.73□□□□□ -2.13
HOXC5Q00444 AC097493.1-201ENST00000463958 372 ntBASIC1.73□□□□□ -2.13
HOXC5Q00444 DYNLL1P5-201ENST00000467158 270 ntBASIC1.73□□□□□ -2.13
HOXC5Q00444 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.73□□□□□ -2.13
HOXC5Q00444 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.73□□□□□ -2.13
HOXC5Q00444 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.73□□□□□ -2.13
HOXC5Q00444 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.73□□□□□ -2.13
HOXC5Q00444 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.73□□□□□ -2.13
HOXC5Q00444 AC124283.4-201ENST00000581815 456 ntBASIC1.73□□□□□ -2.13
HOXC5Q00444 MIR3199-1-201ENST00000582434 88 ntBASIC1.73□□□□□ -2.13
HOXC5Q00444 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.73□□□□□ -2.13
HOXC5Q00444 AC025588.2-201ENST00000604851 466 ntBASIC1.73□□□□□ -2.13
HOXC5Q00444 AL158211.4-201ENST00000606988 584 ntBASIC1.73□□□□□ -2.13
HOXC5Q00444 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.73□□□□□ -2.13
HOXC5Q00444 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HOXC5Q00444 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
HOXC5Q00444 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
HOXC5Q00444 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
HOXC5Q00444 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HOXC5Q00444 MTND4P27-201ENST00000450813 1354 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HOXC5Q00444 SNRPEP3-201ENST00000338402 276 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 RNU5E-8P-201ENST00000363502 116 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 RNU6-884P-201ENST00000363889 107 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
HOXC5Q00444 RNU1-39P-201ENST00000383897 165 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 RNU6-140P-201ENST00000384566 108 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 RNU6-253P-201ENST00000384730 105 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 SNORA46.1-201ENST00000391069 153 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 RSL24D1P4-201ENST00000400938 484 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 AL079342.1-201ENST00000401460 267 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 AL109755.1-201ENST00000401791 649 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 AL450338.1-201ENST00000407987 512 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 RNU6-920P-201ENST00000410926 92 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 AL356379.1-201ENST00000414105 126 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 AL592310.1-201ENST00000414330 671 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.72□□□□□ -2.13
HOXC5Q00444 AL139421.1-201ENST00000423010 169 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.72□□□□□ -2.13
HOXC5Q00444 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.72□□□□□ -2.13
HOXC5Q00444 ARF4P4-201ENST00000439608 520 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HOXC5Q00444 MTATP6P7-201ENST00000453315 681 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 RPL26P9-201ENST00000457466 433 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 KLF3P2-201ENST00000465138 268 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.72□□□□□ -2.13
HOXC5Q00444 AC090453.1-201ENST00000495560 436 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 RNU5F-8P-201ENST00000515941 111 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 RNU6-1261P-201ENST00000517194 104 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 RNU6-840P-201ENST00000517275 65 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 SCARNA11.3-201ENST00000517276 130 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.72□□□□□ -2.13
HOXC5Q00444 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
HOXC5Q00444 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.72□□□□□ -2.13
HOXC5Q00444 CYCSP26-201ENST00000534107 320 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.72□□□□□ -2.13
HOXC5Q00444 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
HOXC5Q00444 HSPE1P3-201ENST00000559254 309 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.72□□□□□ -2.13
HOXC5Q00444 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.72□□□□□ -2.13
HOXC5Q00444 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.72□□□□□ -2.13
HOXC5Q00444 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.72□□□□□ -2.13
HOXC5Q00444 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.72□□□□□ -2.13
HOXC5Q00444 AL158801.5-201ENST00000623123 465 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.72□□□□□ -2.13
HOXC5Q00444 MIR1322-201ENST00000638013 71 ntBASIC1.72□□□□□ -2.13
HOXC5Q00444 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
HOXC5Q00444 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HOXC5Q00444 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.72□□□□□ -2.13
HOXC5Q00444 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
HOXC5Q00444 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 RNA5SP88-201ENST00000365560 109 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 MIR218-1-201ENST00000384999 110 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 RPL22P22-201ENST00000395439 379 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 RPL23AP29-201ENST00000397284 453 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 CYCSP48-201ENST00000417124 323 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.71□□□□□ -2.14
HOXC5Q00444 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.71□□□□□ -2.14
HOXC5Q00444 FAM204CP-201ENST00000424489 642 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.71□□□□□ -2.14
HOXC5Q00444 SDCBPP1-201ENST00000440192 890 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 AC002381.1-201ENST00000447049 280 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 AL353718.1-201ENST00000451028 517 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.71□□□□□ -2.14
HOXC5Q00444 AC098591.2-201ENST00000510152 315 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 AC006499.2-201ENST00000513470 337 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 RNU2-44P-201ENST00000516795 194 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.71□□□□□ -2.14
HOXC5Q00444 BTF3P12-201ENST00000519620 469 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 AC022861.1-201ENST00000522981 663 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms