Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC104010.1-201ENST00000616889 150 ntBASIC3.08□□□□□ -1.92
IRX4P78413 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
IRX4P78413 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.08□□□□□ -1.92
IRX4P78413 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
IRX4P78413 AL161431.1-201ENST00000618966 4205 ntBASIC3.08□□□□□ -1.92
IRX4P78413 AC008568.2-201ENST00000623862 2313 ntBASIC3.07□□□□□ -1.92
IRX4P78413 FGF7P2-201ENST00000332473 296 ntBASIC3.07□□□□□ -1.92
IRX4P78413 RNU5A-1-201ENST00000362698 116 ntBASIC3.07□□□□□ -1.92
IRX4P78413 RNU5E-8P-201ENST00000363502 116 ntBASIC3.07□□□□□ -1.92
IRX4P78413 RNU6-1078P-201ENST00000364522 103 ntBASIC3.07□□□□□ -1.92
IRX4P78413 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
IRX4P78413 RNU6-114P-201ENST00000384704 105 ntBASIC3.07□□□□□ -1.92
IRX4P78413 RNU6-1197P-201ENST00000391183 107 ntBASIC3.07□□□□□ -1.92
IRX4P78413 RNA5SP274-201ENST00000410484 108 ntBASIC3.07□□□□□ -1.92
IRX4P78413 AC018630.2-202ENST00000422992 927 ntBASIC3.07□□□□□ -1.92
IRX4P78413 PPP1R11P2-201ENST00000423543 382 ntBASIC3.07□□□□□ -1.92
IRX4P78413 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.07□□□□□ -1.92
IRX4P78413 AL356583.2-201ENST00000426536 280 ntBASIC3.07□□□□□ -1.92
IRX4P78413 AL139132.1-201ENST00000431587 344 ntBASIC3.07□□□□□ -1.92
IRX4P78413 MTND1P28-201ENST00000435623 950 ntBASIC3.07□□□□□ -1.92
IRX4P78413 NDUFB4P6-201ENST00000436819 366 ntBASIC3.07□□□□□ -1.92
IRX4P78413 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.07□□□□□ -1.92
IRX4P78413 MTND1P29-201ENST00000448112 647 ntBASIC3.07□□□□□ -1.92
IRX4P78413 AL590365.1-201ENST00000450788 243 ntBASIC3.07□□□□□ -1.92
IRX4P78413 RNU6-956P-201ENST00000458868 103 ntBASIC3.07□□□□□ -1.92
IRX4P78413 RPL21P41-201ENST00000459863 264 ntBASIC3.07□□□□□ -1.92
IRX4P78413 HSPE1P6-201ENST00000479457 291 ntBASIC3.07□□□□□ -1.92
IRX4P78413 RN7SL20P-201ENST00000488827 297 ntBASIC3.07□□□□□ -1.92
IRX4P78413 SNORD59.2-201ENST00000516873 68 ntBASIC3.07□□□□□ -1.92
IRX4P78413 RN7SKP272-201ENST00000516988 232 ntBASIC3.07□□□□□ -1.92
IRX4P78413 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.07□□□□□ -1.92
IRX4P78413 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.07□□□□□ -1.92
IRX4P78413 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
IRX4P78413 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.07□□□□□ -1.92
IRX4P78413 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.07□□□□□ -1.92
IRX4P78413 ZNF519P3-201ENST00000557158 1032 ntBASIC3.07□□□□□ -1.92
IRX4P78413 AC005951.1-201ENST00000576706 485 ntBASIC3.07□□□□□ -1.92
IRX4P78413 MIR3921-201ENST00000577308 85 ntBASIC3.07□□□□□ -1.92
IRX4P78413 AC060771.1-201ENST00000582031 164 ntBASIC3.07□□□□□ -1.92
IRX4P78413 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.07□□□□□ -1.92
IRX4P78413 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.07□□□□□ -1.92
IRX4P78413 AC119751.7-201ENST00000600494 245 ntBASIC3.07□□□□□ -1.92
IRX4P78413 MIR6130-201ENST00000619419 109 ntBASIC3.07□□□□□ -1.92
IRX4P78413 AC079597.1-201ENST00000624306 508 ntBASIC3.07□□□□□ -1.92
IRX4P78413 AL359757.2-201ENST00000624309 274 ntBASIC3.07□□□□□ -1.92
IRX4P78413 IGHVIII-44-202ENST00000636235 289 ntBASIC3.07□□□□□ -1.92
IRX4P78413 AC090582.1-201ENST00000636321 199 ntBASIC3.07□□□□□ -1.92
IRX4P78413 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
IRX4P78413 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
IRX4P78413 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
IRX4P78413 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
IRX4P78413 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
IRX4P78413 Y_RNA.201-201ENST00000364052 96 ntBASIC3.06□□□□□ -1.92
IRX4P78413 Y_RNA.318-201ENST00000365131 97 ntBASIC3.06□□□□□ -1.92
IRX4P78413 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
IRX4P78413 SNORA1.3-201ENST00000384676 136 ntBASIC3.06□□□□□ -1.92
IRX4P78413 SNORD67-201ENST00000390833 111 ntBASIC3.06□□□□□ -1.92
IRX4P78413 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
IRX4P78413 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
IRX4P78413 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.06□□□□□ -1.92
IRX4P78413 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.06□□□□□ -1.92
IRX4P78413 VN1R108P-201ENST00000431580 830 ntBASIC3.06□□□□□ -1.92
IRX4P78413 RPL22P17-201ENST00000438729 315 ntBASIC3.06□□□□□ -1.92
IRX4P78413 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.06□□□□□ -1.92
IRX4P78413 AL135938.1-201ENST00000443141 297 ntBASIC3.06□□□□□ -1.92
IRX4P78413 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.06□□□□□ -1.92
IRX4P78413 AC016696.1-201ENST00000446949 318 ntBASIC3.06□□□□□ -1.92
IRX4P78413 USP9YP12-201ENST00000450481 570 ntBASIC3.06□□□□□ -1.92
IRX4P78413 AP1S2P1-201ENST00000457344 379 ntBASIC3.06□□□□□ -1.92
IRX4P78413 AP004217.1-201ENST00000480579 346 ntBASIC3.06□□□□□ -1.92
IRX4P78413 MTND4LP22-201ENST00000508209 276 ntBASIC3.06□□□□□ -1.92
IRX4P78413 FABP5P5-201ENST00000515537 406 ntBASIC3.06□□□□□ -1.92
IRX4P78413 RNU6-798P-201ENST00000516912 103 ntBASIC3.06□□□□□ -1.92
IRX4P78413 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.06□□□□□ -1.92
IRX4P78413 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.06□□□□□ -1.92
IRX4P78413 AC005832.2-201ENST00000538921 1430 ntBASIC3.06□□□□□ -1.92
IRX4P78413 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
IRX4P78413 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.06□□□□□ -1.92
IRX4P78413 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.06□□□□□ -1.92
IRX4P78413 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.06□□□□□ -1.92
IRX4P78413 MTCYBP33-201ENST00000575007 1130 ntBASIC3.06□□□□□ -1.92
IRX4P78413 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
IRX4P78413 AC004832.5-201ENST00000608677 401 ntBASIC3.06□□□□□ -1.92
IRX4P78413 AC027309.3-201ENST00000623419 351 ntBASIC3.06□□□□□ -1.92
IRX4P78413 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.06□□□□□ -1.92
IRX4P78413 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
IRX4P78413 RNU4-82P-201ENST00000362443 140 ntBASIC3.05□□□□□ -1.92
IRX4P78413 Y_RNA.46-201ENST00000362695 102 ntBASIC3.05□□□□□ -1.92
IRX4P78413 RNY4P24-201ENST00000362735 96 ntBASIC3.05□□□□□ -1.92
IRX4P78413 SNORA14A-201ENST00000364773 135 ntBASIC3.05□□□□□ -1.92
IRX4P78413 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.05□□□□□ -1.92
IRX4P78413 Y_RNA.436-201ENST00000384097 102 ntBASIC3.05□□□□□ -1.92
IRX4P78413 Y_RNA.553-201ENST00000384670 102 ntBASIC3.05□□□□□ -1.92
IRX4P78413 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
IRX4P78413 RNA5SP252-201ENST00000391131 119 ntBASIC3.05□□□□□ -1.92
IRX4P78413 RPS20P2-201ENST00000402520 389 ntBASIC3.05□□□□□ -1.92
IRX4P78413 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.05□□□□□ -1.92
IRX4P78413 UBE2V1P13-201ENST00000436983 439 ntBASIC3.05□□□□□ -1.92
IRX4P78413 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.05□□□□□ -1.92
IRX4P78413 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms