Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RNU1-41P-201ENST00000516161 162 ntBASIC1.65□□□□□ -2.15
HIST1H3AP68431 RNU1-48P-201ENST00000516400 162 ntBASIC1.65□□□□□ -2.15
HIST1H3AP68431 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.65□□□□□ -2.15
HIST1H3AP68431 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.65□□□□□ -2.15
HIST1H3AP68431 AL132857.1-201ENST00000555180 708 ntBASIC1.65□□□□□ -2.15
HIST1H3AP68431 MIR4529-201ENST00000578110 78 ntBASIC1.65□□□□□ -2.15
HIST1H3AP68431 AC078899.2-201ENST00000595282 212 ntBASIC1.65□□□□□ -2.15
HIST1H3AP68431 AL096840.1-201ENST00000603287 93 ntBASIC1.65□□□□□ -2.15
HIST1H3AP68431 AC069294.1-201ENST00000608397 350 ntBASIC1.65□□□□□ -2.15
HIST1H3AP68431 FTX_3.1-201ENST00000610451 147 ntBASIC1.65□□□□□ -2.15
HIST1H3AP68431 AC026634.1-201ENST00000634369 198 ntBASIC1.65□□□□□ -2.15
HIST1H3AP68431 AC010889.1-201ENST00000566193 2666 ntBASIC1.65□□□□□ -2.15
HIST1H3AP68431 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
HIST1H3AP68431 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.65□□□□□ -2.15
HIST1H3AP68431 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
HIST1H3AP68431 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
HIST1H3AP68431 AL109755.1-201ENST00000401791 649 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 AL450338.1-201ENST00000407987 512 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HIST1H3AP68431 BOLA3P4-201ENST00000418151 400 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 AC008173.1-201ENST00000418901 264 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 EIF1AXP1-201ENST00000419267 435 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.64□□□□□ -2.15
HIST1H3AP68431 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 RPL30P4-201ENST00000429309 333 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.64□□□□□ -2.15
HIST1H3AP68431 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.64□□□□□ -2.15
HIST1H3AP68431 FABP5P13-201ENST00000452144 328 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.64□□□□□ -2.15
HIST1H3AP68431 AC007182.2-201ENST00000489251 402 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 HMGB3P17-201ENST00000504195 649 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.64□□□□□ -2.15
HIST1H3AP68431 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.64□□□□□ -2.15
HIST1H3AP68431 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.64□□□□□ -2.15
HIST1H3AP68431 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.64□□□□□ -2.15
HIST1H3AP68431 BNIP3P24-201ENST00000593398 557 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 RPAP2P1-201ENST00000603626 1168 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 AC004853.1-201ENST00000604902 698 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 AP002791.1-201ENST00000623291 381 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.64□□□□□ -2.15
HIST1H3AP68431 AC104454.1-201ENST00000421341 1401 ntBASIC1.64□□□□□ -2.15
HIST1H3AP68431 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HIST1H3AP68431 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.63□□□□□ -2.15
HIST1H3AP68431 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HIST1H3AP68431 RNA5SP276-201ENST00000362580 94 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 RPL23AP29-201ENST00000397284 453 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 MIR888-201ENST00000401186 77 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 RNU2-20P-201ENST00000410425 191 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.63□□□□□ -2.15
HIST1H3AP68431 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.63□□□□□ -2.15
HIST1H3AP68431 AC003685.2-201ENST00000422795 395 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 PPP1R11P2-201ENST00000423543 382 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.63□□□□□ -2.15
HIST1H3AP68431 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.63□□□□□ -2.15
HIST1H3AP68431 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.63□□□□□ -2.15
HIST1H3AP68431 MTND2P5-201ENST00000432656 1006 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.63□□□□□ -2.15
HIST1H3AP68431 MTCYBP45-201ENST00000435243 565 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 RPL35AP22-201ENST00000436855 335 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 AC016691.1-201ENST00000441321 413 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 RNFT1P2-201ENST00000443064 757 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.63□□□□□ -2.15
HIST1H3AP68431 AC080013.2-201ENST00000460866 323 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 RPS29P21-201ENST00000496272 170 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 MRPS17P9-201ENST00000511924 393 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 RNA5SP182-201ENST00000516064 82 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.63□□□□□ -2.15
HIST1H3AP68431 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.63□□□□□ -2.15
HIST1H3AP68431 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.63□□□□□ -2.15
HIST1H3AP68431 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.63□□□□□ -2.15
HIST1H3AP68431 AL049838.1-201ENST00000563647 981 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 AC090897.2-201ENST00000581715 130 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 AC105245.1-201ENST00000581934 244 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.63□□□□□ -2.15
HIST1H3AP68431 AL590099.1-201ENST00000615276 138 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 AC004009.2-201ENST00000623016 728 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 PISRT1-201ENST00000626175 531 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 U6.101-201ENST00000637707 76 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 MTND5P29-201ENST00000458676 1807 ntBASIC1.63□□□□□ -2.15
HIST1H3AP68431 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
HIST1H3AP68431 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
HIST1H3AP68431 HSPA8P4-201ENST00000511877 1920 ntBASIC1.62□□□□□ -2.15
HIST1H3AP68431 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.62□□□□□ -2.15
HIST1H3AP68431 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
HIST1H3AP68431 U8.2-201ENST00000363156 134 ntBASIC1.62□□□□□ -2.15
HIST1H3AP68431 RNU6-839P-201ENST00000363347 108 ntBASIC1.62□□□□□ -2.15
HIST1H3AP68431 SNORA16.1-201ENST00000364597 132 ntBASIC1.62□□□□□ -2.15
HIST1H3AP68431 RNU6-253P-201ENST00000384730 105 ntBASIC1.62□□□□□ -2.15
HIST1H3AP68431 AL445183.3-201ENST00000414168 502 ntBASIC1.62□□□□□ -2.15
HIST1H3AP68431 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.62□□□□□ -2.15
HIST1H3AP68431 AC007742.1-201ENST00000425789 329 ntBASIC1.62□□□□□ -2.15
HIST1H3AP68431 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.62□□□□□ -2.15
HIST1H3AP68431 ELOCP26-201ENST00000436067 329 ntBASIC1.62□□□□□ -2.15
HIST1H3AP68431 AC005297.2-201ENST00000450430 606 ntBASIC1.62□□□□□ -2.15
HIST1H3AP68431 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.62□□□□□ -2.15
HIST1H3AP68431 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
HIST1H3AP68431 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.62□□□□□ -2.15
HIST1H3AP68431 AC008526.1-201ENST00000509149 338 ntBASIC1.62□□□□□ -2.15
HIST1H3AP68431 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms