Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 MTCO2P15-201ENST00000532655 656 ntBASIC1.04□□□□□ -2.24
RPS28P62857 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.04□□□□□ -2.24
RPS28P62857 AC005832.3-201ENST00000537929 631 ntBASIC1.04□□□□□ -2.24
RPS28P62857 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.04□□□□□ -2.24
RPS28P62857 AC007375.1-201ENST00000554513 578 ntBASIC1.04□□□□□ -2.24
RPS28P62857 RPL21P5-201ENST00000554662 472 ntBASIC1.04□□□□□ -2.24
RPS28P62857 AC019288.1-201ENST00000557918 224 ntBASIC1.04□□□□□ -2.24
RPS28P62857 MIR5186-201ENST00000577504 120 ntBASIC1.04□□□□□ -2.24
RPS28P62857 MIR4277-201ENST00000578298 84 ntBASIC1.04□□□□□ -2.24
RPS28P62857 MIR5685-201ENST00000579080 79 ntBASIC1.04□□□□□ -2.24
RPS28P62857 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.04□□□□□ -2.24
RPS28P62857 ELOCP5-201ENST00000604924 333 ntBASIC1.04□□□□□ -2.24
RPS28P62857 RMST_10.1-201ENST00000616309 154 ntBASIC1.04□□□□□ -2.24
RPS28P62857 AP000648.3-201ENST00000623539 4507 ntBASIC1.04□□□□□ -2.24
RPS28P62857 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.04□□□□□ -2.24
RPS28P62857 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RPS28P62857 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.04□□□□□ -2.24
RPS28P62857 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
RPS28P62857 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
RPS28P62857 RNA5SP50-201ENST00000363731 107 ntBASIC1.03□□□□□ -2.24
RPS28P62857 RNU1-42P-201ENST00000364033 160 ntBASIC1.03□□□□□ -2.24
RPS28P62857 SNORA54-201ENST00000384281 123 ntBASIC1.03□□□□□ -2.24
RPS28P62857 MIR597-201ENST00000384968 97 ntBASIC1.03□□□□□ -2.24
RPS28P62857 RNU6-796P-201ENST00000391086 107 ntBASIC1.03□□□□□ -2.24
RPS28P62857 AC007066.1-201ENST00000392902 381 ntBASIC1.03□□□□□ -2.24
RPS28P62857 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC1.03□□□□□ -2.24
RPS28P62857 SFR1P2-201ENST00000421841 730 ntBASIC1.03□□□□□ -2.24
RPS28P62857 BX510359.4-201ENST00000423750 193 ntBASIC1.03□□□□□ -2.24
RPS28P62857 RPF2P1-201ENST00000424137 906 ntBASIC1.03□□□□□ -2.24
RPS28P62857 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.03□□□□□ -2.24
RPS28P62857 RPL7P2-201ENST00000427639 268 ntBASIC1.03□□□□□ -2.24
RPS28P62857 RPL7P34-201ENST00000433316 712 ntBASIC1.03□□□□□ -2.24
RPS28P62857 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.03□□□□□ -2.24
RPS28P62857 MOB1AP2-201ENST00000446060 614 ntBASIC1.03□□□□□ -2.24
RPS28P62857 AC079448.1-201ENST00000449377 373 ntBASIC1.03□□□□□ -2.24
RPS28P62857 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
RPS28P62857 RPL7P61-201ENST00000451721 751 ntBASIC1.03□□□□□ -2.24
RPS28P62857 AL049873.1-201ENST00000480540 376 ntBASIC1.03□□□□□ -2.24
RPS28P62857 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.03□□□□□ -2.24
RPS28P62857 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.03□□□□□ -2.24
RPS28P62857 AC093677.1-201ENST00000514414 678 ntBASIC1.03□□□□□ -2.24
RPS28P62857 SNORA48.9-201ENST00000516419 162 ntBASIC1.03□□□□□ -2.24
RPS28P62857 RNU6-667P-201ENST00000517186 102 ntBASIC1.03□□□□□ -2.24
RPS28P62857 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.03□□□□□ -2.24
RPS28P62857 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.03□□□□□ -2.24
RPS28P62857 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
RPS28P62857 MIR4480-201ENST00000582492 71 ntBASIC1.03□□□□□ -2.24
RPS28P62857 AL451007.1-201ENST00000595491 289 ntBASIC1.03□□□□□ -2.24
RPS28P62857 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.03□□□□□ -2.24
RPS28P62857 AC005972.3-201ENST00000606304 481 ntBASIC1.03□□□□□ -2.24
RPS28P62857 AP001033.2-201ENST00000609701 1003 ntBASIC1.03□□□□□ -2.24
RPS28P62857 AC103710.2-201ENST00000609912 942 ntBASIC1.03□□□□□ -2.24
RPS28P62857 AC239803.2-201ENST00000610161 430 ntBASIC1.03□□□□□ -2.24
RPS28P62857 OR8B1P-202ENST00000641132 1178 ntBASIC1.03□□□□□ -2.24
RPS28P62857 AC005539.1-201ENST00000443768 1479 ntBASIC1.03□□□□□ -2.24
RPS28P62857 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.03□□□□□ -2.24
RPS28P62857 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.03□□□□□ -2.25
RPS28P62857 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.03□□□□□ -2.25
RPS28P62857 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RPS28P62857 Y_RNA.245-201ENST00000364493 95 ntBASIC1.02□□□□□ -2.25
RPS28P62857 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
RPS28P62857 U3.19-201ENST00000390893 196 ntBASIC1.02□□□□□ -2.25
RPS28P62857 RNU2-36P-201ENST00000410361 191 ntBASIC1.02□□□□□ -2.25
RPS28P62857 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RPS28P62857 NANOGP5-201ENST00000424456 877 ntBASIC1.02□□□□□ -2.25
RPS28P62857 AL117339.2-201ENST00000430475 180 ntBASIC1.02□□□□□ -2.25
RPS28P62857 AC018634.1-201ENST00000437554 401 ntBASIC1.02□□□□□ -2.25
RPS28P62857 RPL21P89-201ENST00000444021 467 ntBASIC1.02□□□□□ -2.25
RPS28P62857 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.02□□□□□ -2.25
RPS28P62857 AC112492.4-201ENST00000456549 352 ntBASIC1.02□□□□□ -2.25
RPS28P62857 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.02□□□□□ -2.25
RPS28P62857 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC1.02□□□□□ -2.25
RPS28P62857 AC112771.1-201ENST00000463581 102 ntBASIC1.02□□□□□ -2.25
RPS28P62857 AL121594.1-201ENST00000475906 575 ntBASIC1.02□□□□□ -2.25
RPS28P62857 MTCYBP35-201ENST00000503630 1137 ntBASIC1.02□□□□□ -2.25
RPS28P62857 AC118282.2-201ENST00000508739 374 ntBASIC1.02□□□□□ -2.25
RPS28P62857 SETP12-201ENST00000514068 805 ntBASIC1.02□□□□□ -2.25
RPS28P62857 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.02□□□□□ -2.25
RPS28P62857 MIR2116-201ENST00000517221 80 ntBASIC1.02□□□□□ -2.25
RPS28P62857 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.02□□□□□ -2.25
RPS28P62857 OR5B19P-201ENST00000531766 928 ntBASIC1.02□□□□□ -2.25
RPS28P62857 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.02□□□□□ -2.25
RPS28P62857 AC125611.1-201ENST00000549563 229 ntBASIC1.02□□□□□ -2.25
RPS28P62857 PSMA3P-201ENST00000555485 635 ntBASIC1.02□□□□□ -2.25
RPS28P62857 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.02□□□□□ -2.25
RPS28P62857 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC1.02□□□□□ -2.25
RPS28P62857 AC012213.3-201ENST00000577199 777 ntBASIC1.02□□□□□ -2.25
RPS28P62857 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.02□□□□□ -2.25
RPS28P62857 AL713866.2-201ENST00000603579 219 ntBASIC1.02□□□□□ -2.25
RPS28P62857 CYP2C61P-201ENST00000604072 290 ntBASIC1.02□□□□□ -2.25
RPS28P62857 AL355598.1-201ENST00000604169 202 ntBASIC1.02□□□□□ -2.25
RPS28P62857 AC021646.1-201ENST00000605469 484 ntBASIC1.02□□□□□ -2.25
RPS28P62857 FAM25E-202ENST00000608562 189 ntBASIC1.02□□□□□ -2.25
RPS28P62857 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.02□□□□□ -2.25
RPS28P62857 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC1.02□□□□□ -2.25
RPS28P62857 AC048341.3-201ENST00000619323 491 ntBASIC1.02□□□□□ -2.25
RPS28P62857 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.02□□□□□ -2.25
RPS28P62857 AC132825.7-201ENST00000638744 335 ntBASIC1.02□□□□□ -2.25
RPS28P62857 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.02□□□□□ -2.25
RPS28P62857 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms