Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.41□□□□□ -1.7
NEK4P51957 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.41□□□□□ -1.7
NEK4P51957 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEK4P51957 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.41□□□□□ -1.7
NEK4P51957 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEK4P51957 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEK4P51957 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NEK4P51957 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEK4P51957 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
NEK4P51957 USP8P1-201ENST00000494673 3183 ntBASIC4.41□□□□□ -1.7
NEK4P51957 OR4G2P-202ENST00000641004 1759 ntBASIC4.4□□□□□ -1.7
NEK4P51957 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.4□□□□□ -1.7
NEK4P51957 MIR423-201ENST00000362201 94 ntBASIC4.4□□□□□ -1.71
NEK4P51957 SNORA31-201ENST00000362607 130 ntBASIC4.4□□□□□ -1.71
NEK4P51957 Y_RNA.166-201ENST00000363730 102 ntBASIC4.4□□□□□ -1.71
NEK4P51957 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEK4P51957 MIR708-201ENST00000390708 88 ntBASIC4.4□□□□□ -1.71
NEK4P51957 AL139397.2-201ENST00000404529 772 ntBASIC4.4□□□□□ -1.71
NEK4P51957 RNU4-26P-201ENST00000410270 107 ntBASIC4.4□□□□□ -1.71
NEK4P51957 EEF1A1P40-201ENST00000412883 573 ntBASIC4.4□□□□□ -1.71
NEK4P51957 ARL5AP1-201ENST00000418991 388 ntBASIC4.4□□□□□ -1.71
NEK4P51957 MTCO3P46-201ENST00000425787 232 ntBASIC4.4□□□□□ -1.71
NEK4P51957 RPL21P66-201ENST00000426566 466 ntBASIC4.4□□□□□ -1.71
NEK4P51957 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.4□□□□□ -1.71
NEK4P51957 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.4□□□□□ -1.71
NEK4P51957 PRDX3P3-201ENST00000447765 522 ntBASIC4.4□□□□□ -1.71
NEK4P51957 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK4P51957 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK4P51957 AC007547.1-201ENST00000462177 490 ntBASIC4.4□□□□□ -1.71
NEK4P51957 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK4P51957 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NEK4P51957 CCDC34P1-201ENST00000507441 517 ntBASIC4.4□□□□□ -1.71
NEK4P51957 AL359273.1-201ENST00000510918 627 ntBASIC4.4□□□□□ -1.71
NEK4P51957 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.4□□□□□ -1.71
NEK4P51957 AL118558.2-201ENST00000556294 238 ntBASIC4.4□□□□□ -1.71
NEK4P51957 MIR4738-201ENST00000579134 87 ntBASIC4.4□□□□□ -1.71
NEK4P51957 MIR5583-1-201ENST00000580941 59 ntBASIC4.4□□□□□ -1.71
NEK4P51957 AL670379.4-201ENST00000605279 254 ntBASIC4.4□□□□□ -1.71
NEK4P51957 AL158032.1-201ENST00000605401 106 ntBASIC4.4□□□□□ -1.71
NEK4P51957 AC034102.8-201ENST00000615146 484 ntBASIC4.4□□□□□ -1.71
NEK4P51957 AC009248.2-201ENST00000619826 254 ntBASIC4.4□□□□□ -1.71
NEK4P51957 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
NEK4P51957 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEK4P51957 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.4□□□□□ -1.71
NEK4P51957 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEK4P51957 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEK4P51957 MTND4P35-201ENST00000604257 1375 ntBASIC4.4□□□□□ -1.71
NEK4P51957 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEK4P51957 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NEK4P51957 MAPK10-372ENST00000641954 3413 ntBASIC4.39□□□□□ -1.71
NEK4P51957 CEP170P1-201ENST00000502249 4587 ntBASIC4.39□□□□□ -1.71
NEK4P51957 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEK4P51957 RNU6-288P-201ENST00000363690 104 ntBASIC4.39□□□□□ -1.71
NEK4P51957 SNORA51.2-201ENST00000364595 132 ntBASIC4.39□□□□□ -1.71
NEK4P51957 RNA5SP189-201ENST00000364920 115 ntBASIC4.39□□□□□ -1.71
NEK4P51957 RNA5SP167-201ENST00000365461 116 ntBASIC4.39□□□□□ -1.71
NEK4P51957 RNA5SP283-201ENST00000365604 119 ntBASIC4.39□□□□□ -1.71
NEK4P51957 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NEK4P51957 RNU6-116P-201ENST00000384042 109 ntBASIC4.39□□□□□ -1.71
NEK4P51957 AL592114.1-201ENST00000403842 483 ntBASIC4.39□□□□□ -1.71
NEK4P51957 RPS12P24-201ENST00000412619 387 ntBASIC4.39□□□□□ -1.71
NEK4P51957 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.39□□□□□ -1.71
NEK4P51957 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.39□□□□□ -1.71
NEK4P51957 PDCL2P1-201ENST00000419302 352 ntBASIC4.39□□□□□ -1.71
NEK4P51957 AL645937.1-202ENST00000421799 937 ntBASIC4.39□□□□□ -1.71
NEK4P51957 RPL35AP12-201ENST00000425362 338 ntBASIC4.39□□□□□ -1.71
NEK4P51957 HMGB1P27-201ENST00000431429 603 ntBASIC4.39□□□□□ -1.71
NEK4P51957 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.39□□□□□ -1.71
NEK4P51957 RPS29P31-201ENST00000446147 164 ntBASIC4.39□□□□□ -1.71
NEK4P51957 RPL7P12-201ENST00000446719 750 ntBASIC4.39□□□□□ -1.71
NEK4P51957 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.39□□□□□ -1.71
NEK4P51957 AC087588.1-201ENST00000462203 316 ntBASIC4.39□□□□□ -1.71
NEK4P51957 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.39□□□□□ -1.71
NEK4P51957 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.39□□□□□ -1.71
NEK4P51957 Y_RNA.665-201ENST00000516177 98 ntBASIC4.39□□□□□ -1.71
NEK4P51957 SCARNA15.2-201ENST00000516409 127 ntBASIC4.39□□□□□ -1.71
NEK4P51957 AC107953.1-201ENST00000522216 297 ntBASIC4.39□□□□□ -1.71
NEK4P51957 AC243972.3-201ENST00000539655 198 ntBASIC4.39□□□□□ -1.71
NEK4P51957 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.39□□□□□ -1.71
NEK4P51957 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.39□□□□□ -1.71
NEK4P51957 AL138889.2-201ENST00000603883 242 ntBASIC4.39□□□□□ -1.71
NEK4P51957 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.39□□□□□ -1.71
NEK4P51957 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.39□□□□□ -1.71
NEK4P51957 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.39□□□□□ -1.71
NEK4P51957 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.39□□□□□ -1.71
NEK4P51957 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
NEK4P51957 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.39□□□□□ -1.71
NEK4P51957 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
NEK4P51957 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NEK4P51957 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NEK4P51957 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.38□□□□□ -1.71
NEK4P51957 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEK4P51957 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEK4P51957 Y_RNA.100-201ENST00000363141 102 ntBASIC4.38□□□□□ -1.71
NEK4P51957 Y_RNA.142-201ENST00000363491 102 ntBASIC4.38□□□□□ -1.71
NEK4P51957 U3.12-201ENST00000364498 214 ntBASIC4.38□□□□□ -1.71
NEK4P51957 RNU6-510P-201ENST00000391239 108 ntBASIC4.38□□□□□ -1.71
NEK4P51957 NDUFB4P7-201ENST00000423198 363 ntBASIC4.38□□□□□ -1.71
NEK4P51957 AL591212.2-201ENST00000433923 257 ntBASIC4.38□□□□□ -1.71
NEK4P51957 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms