Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MTND5P33-201ENST00000571250 1450 ntBASIC2.7□□□□□ -1.98
HCFC1P51610 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.7□□□□□ -1.98
HCFC1P51610 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.7□□□□□ -1.98
HCFC1P51610 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HCFC1P51610 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
HCFC1P51610 FRG1BP-201ENST00000278882 761 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HCFC1P51610 OR5J1P-201ENST00000313544 939 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 RPL7P26-201ENST00000333817 754 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 Y_RNA.6-201ENST00000362350 114 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 RNU6-533P-201ENST00000384144 107 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 HMGB3P23-201ENST00000414981 585 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.69□□□□□ -1.98
HCFC1P51610 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.69□□□□□ -1.98
HCFC1P51610 MTND1P23-201ENST00000416931 372 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.69□□□□□ -1.98
HCFC1P51610 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.69□□□□□ -1.98
HCFC1P51610 AC010975.2-201ENST00000427781 588 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.69□□□□□ -1.98
HCFC1P51610 FAM103A2P-201ENST00000444122 354 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.69□□□□□ -1.98
HCFC1P51610 Z99127.3-201ENST00000448158 395 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.69□□□□□ -1.98
HCFC1P51610 AC027673.1-201ENST00000456245 405 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.69□□□□□ -1.98
HCFC1P51610 AC004801.2-202ENST00000463559 283 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.69□□□□□ -1.98
HCFC1P51610 RNU6-506P-201ENST00000516553 94 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 RNA5SP367-201ENST00000516557 118 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC068657.1-201ENST00000520807 306 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 SNRPGP16-201ENST00000533275 226 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC124947.2-202ENST00000552735 133 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.69□□□□□ -1.98
HCFC1P51610 MIR4319-201ENST00000577285 85 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AL022154.1-201ENST00000604698 785 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.69□□□□□ -1.98
HCFC1P51610 AC009161.2-201ENST00000624626 138 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 MTND5P3-201ENST00000438536 1800 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HCFC1P51610 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HCFC1P51610 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HCFC1P51610 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
HCFC1P51610 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.69□□□□□ -1.98
HCFC1P51610 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
HCFC1P51610 AC018630.2-202ENST00000422992 927 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.69□□□□□ -1.98
HCFC1P51610 AC007283.2-201ENST00000424739 197 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC133104.1-201ENST00000429100 218 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 MTCO2P11-201ENST00000431069 680 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.69□□□□□ -1.98
HCFC1P51610 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.69□□□□□ -1.98
HCFC1P51610 AC004924.1-201ENST00000480160 781 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 Vault.3-201ENST00000516676 95 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 RNU6-410P-201ENST00000517006 107 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.69□□□□□ -1.98
HCFC1P51610 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.69□□□□□ -1.98
HCFC1P51610 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.69□□□□□ -1.98
HCFC1P51610 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.69□□□□□ -1.98
HCFC1P51610 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.69□□□□□ -1.98
HCFC1P51610 AC006270.2-201ENST00000578523 652 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC068790.3-201ENST00000602988 553 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC112191.3-201ENST00000604371 277 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC126118.1-201ENST00000607744 628 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC097468.3-201ENST00000607956 456 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC007038.2-201ENST00000608095 740 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC107294.1-201ENST00000609524 467 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC006329.2-201ENST00000611491 394 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC006338.1-201ENST00000618453 749 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 AC010149.2-201ENST00000637608 315 ntBASIC2.69□□□□□ -1.98
HCFC1P51610 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HCFC1P51610 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HCFC1P51610 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HCFC1P51610 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HCFC1P51610 HSPE1P11-201ENST00000339579 310 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 MIR22-201ENST00000362190 85 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 Y_RNA.234-201ENST00000364409 97 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.68□□□□□ -1.98
HCFC1P51610 RNU6-297P-201ENST00000384636 107 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 RPS3AP36-201ENST00000398190 775 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 AL136372.1-201ENST00000403060 228 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 BTF3P7-201ENST00000407097 488 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 RNU4-65P-201ENST00000410473 140 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 RNU6-248P-201ENST00000410720 107 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 AL592148.1-201ENST00000413568 445 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.68□□□□□ -1.98
HCFC1P51610 RPL32P35-201ENST00000415214 394 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 RPS15AP12-201ENST00000419498 388 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.68□□□□□ -1.98
HCFC1P51610 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.68□□□□□ -1.98
HCFC1P51610 MTND4LP10-201ENST00000435146 291 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 TPT1P14-201ENST00000448018 505 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 AC132479.1-201ENST00000449160 144 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 FGF7P6-202ENST00000451282 293 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.68□□□□□ -1.98
HCFC1P51610 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.68□□□□□ -1.98
HCFC1P51610 HMGB1P25-201ENST00000468402 607 ntBASIC2.68□□□□□ -1.98
HCFC1P51610 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms