Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNU5E-5P-201ENST00000365379 116 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 SNORD21-201ENST00000383953 95 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 SNORD116-9-201ENST00000384000 95 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 SNORD116-3-201ENST00000384287 95 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 SNORD116-7-201ENST00000384404 95 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 SNORD116-5-201ENST00000384462 95 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NEDD4P46934 MTCYBP36-201ENST00000404146 440 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 MIR1302-8-201ENST00000408342 128 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.01□□□□□ -1.93
NEDD4P46934 AC080125.1-201ENST00000414888 684 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 CYCSP46-201ENST00000423569 204 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD4P46934 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.01□□□□□ -1.93
NEDD4P46934 AC090774.1-201ENST00000435925 246 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD4P46934 AC118469.1-201ENST00000442943 488 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.01□□□□□ -1.93
NEDD4P46934 RPL31P3-201ENST00000458430 332 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 RPL7P5-201ENST00000471472 736 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AC126389.1-201ENST00000477436 290 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD4P46934 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.01□□□□□ -1.93
NEDD4P46934 AC105313.1-201ENST00000509121 353 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD4P46934 RNU6-201P-201ENST00000517100 61 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AC027176.1-201ENST00000560204 514 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD4P46934 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD4P46934 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AC068790.3-201ENST00000602988 553 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AP001330.4-201ENST00000604350 154 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AC004832.5-201ENST00000608677 401 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AC073114.1-201ENST00000612027 490 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AL450472.3-201ENST00000615578 367 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AC027807.2-201ENST00000616099 408 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AC025048.6-202ENST00000627667 438 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.01□□□□□ -1.93
NEDD4P46934 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
NEDD4P46934 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.01□□□□□ -1.93
NEDD4P46934 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NEDD4P46934 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD4P46934 AL513185.3-201ENST00000433335 1300 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.01□□□□□ -1.93
NEDD4P46934 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
NEDD4P46934 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
NEDD4P46934 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NEDD4P46934 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NEDD4P46934 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
NEDD4P46934 DEFB108F-201ENST00000344638 222 ntBASIC3□□□□□ -1.93
NEDD4P46934 Y_RNA.46-201ENST00000362695 102 ntBASIC3□□□□□ -1.93
NEDD4P46934 RNU6-533P-201ENST00000384144 107 ntBASIC3□□□□□ -1.93
NEDD4P46934 RNU4-65P-201ENST00000410473 140 ntBASIC3□□□□□ -1.93
NEDD4P46934 AC024082.2-201ENST00000434771 238 ntBASIC3□□□□□ -1.93
NEDD4P46934 RPL22P17-201ENST00000438729 315 ntBASIC3□□□□□ -1.93
NEDD4P46934 RNA5SP269-201ENST00000459032 137 ntBASIC3□□□□□ -1.93
NEDD4P46934 AC105914.1-201ENST00000511798 226 ntBASIC3□□□□□ -1.93
NEDD4P46934 AF131216.2-201ENST00000512316 564 ntBASIC3□□□□□ -1.93
NEDD4P46934 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3□□□□□ -1.93
NEDD4P46934 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3□□□□□ -1.93
NEDD4P46934 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3□□□□□ -1.93
NEDD4P46934 RNA5SP148-201ENST00000516527 94 ntBASIC3□□□□□ -1.93
NEDD4P46934 DEFB108D-201ENST00000527787 222 ntBASIC3□□□□□ -1.93
NEDD4P46934 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3□□□□□ -1.93
NEDD4P46934 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3□□□□□ -1.93
NEDD4P46934 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3□□□□□ -1.93
NEDD4P46934 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3□□□□□ -1.93
NEDD4P46934 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3□□□□□ -1.93
NEDD4P46934 AC012065.4-201ENST00000602445 679 ntBASIC3□□□□□ -1.93
NEDD4P46934 NRBF2P5-201ENST00000603087 788 ntBASIC3□□□□□ -1.93
NEDD4P46934 AL359999.1-201ENST00000604513 294 ntBASIC3□□□□□ -1.93
NEDD4P46934 AC068276.1-201ENST00000605793 379 ntBASIC3□□□□□ -1.93
NEDD4P46934 AC004908.2-201ENST00000609090 574 ntBASIC3□□□□□ -1.93
NEDD4P46934 AC093838.1-201ENST00000613014 469 ntBASIC3□□□□□ -1.93
NEDD4P46934 AL138713.1-201ENST00000624026 2130 ntBASIC3□□□□□ -1.93
NEDD4P46934 AL159972.1-201ENST00000625150 448 ntBASIC3□□□□□ -1.93
NEDD4P46934 WARS-244ENST00000627608 123 ntTSL 5 BASIC3□□□□□ -1.93
NEDD4P46934 DDX10P1-201ENST00000448545 1933 ntBASIC3□□□□□ -1.93
NEDD4P46934 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3□□□□□ -1.93
NEDD4P46934 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
NEDD4P46934 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
NEDD4P46934 Y_RNA.77-201ENST00000362962 107 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 RNA5SP68-201ENST00000363885 119 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 RNU1-100P-201ENST00000365255 165 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.99□□□□□ -1.93
NEDD4P46934 RNU6-76P-201ENST00000384060 104 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 RNU6-432P-201ENST00000384196 109 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 SNORD116-1-201ENST00000384335 95 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 RNU6-809P-201ENST00000384461 107 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 MIR591-201ENST00000385290 95 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 RPS3AP24-201ENST00000407896 734 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.99□□□□□ -1.93
NEDD4P46934 MTATP6P4-201ENST00000427725 675 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.99□□□□□ -1.93
NEDD4P46934 KATNBL1P3-201ENST00000443475 909 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.99□□□□□ -1.93
NEDD4P46934 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NEDD4P46934 AC055855.1-201ENST00000489563 579 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.99□□□□□ -1.93
NEDD4P46934 RPL23AP94-201ENST00000512518 302 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms