Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
APOBEC1P41238 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
APOBEC1P41238 OR4G2P-201ENST00000328113 903 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 RNU4-48P-201ENST00000365559 182 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 Y_RNA.409-201ENST00000383990 98 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 RNU6-606P-201ENST00000384721 111 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 MIR454-201ENST00000390180 115 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 RNU6-817P-201ENST00000391083 104 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AL591034.1-201ENST00000407447 340 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 RPS29P4-201ENST00000414733 161 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AC114491.1-201ENST00000416095 246 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.13□□□□□ -1.91
APOBEC1P41238 SDCBPP3-201ENST00000419629 891 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 EIF1P1-201ENST00000421436 341 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AC091390.3-201ENST00000426478 338 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AP000907.1-201ENST00000428428 510 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.13□□□□□ -1.91
APOBEC1P41238 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.13□□□□□ -1.91
APOBEC1P41238 NDUFB4P6-201ENST00000436819 366 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.13□□□□□ -1.91
APOBEC1P41238 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.13□□□□□ -1.91
APOBEC1P41238 RPS15AP9-201ENST00000439856 381 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 BNIP3P2-201ENST00000441221 577 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 DDX3P2-201ENST00000446138 111 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.13□□□□□ -1.91
APOBEC1P41238 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.13□□□□□ -1.91
APOBEC1P41238 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.13□□□□□ -1.91
APOBEC1P41238 AC087588.1-201ENST00000462203 316 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 RPL7L1P8-201ENST00000469911 741 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AC019235.1-201ENST00000503847 207 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.13□□□□□ -1.91
APOBEC1P41238 RNU6-677P-201ENST00000516914 101 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 RN7SKP60-201ENST00000516985 239 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 RNA5SP291-201ENST00000517222 105 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBEC1P41238 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
APOBEC1P41238 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.13□□□□□ -1.91
APOBEC1P41238 MIR4425-201ENST00000580572 84 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AC013553.2-201ENST00000604244 589 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AC007619.2-201ENST00000605743 379 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 SNORA51-201ENST00000606420 132 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AC126118.1-201ENST00000607744 628 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AC092954.2-201ENST00000609103 430 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AC034102.8-201ENST00000615146 484 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 AC093648.1-201ENST00000623546 606 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
APOBEC1P41238 ZNF680P1-201ENST00000436625 1469 ntBASIC3.13□□□□□ -1.91
APOBEC1P41238 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.13□□□□□ -1.91
APOBEC1P41238 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
APOBEC1P41238 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.12□□□□□ -1.91
APOBEC1P41238 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBEC1P41238 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBEC1P41238 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.12□□□□□ -1.91
APOBEC1P41238 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBEC1P41238 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
APOBEC1P41238 SNORA73.2-201ENST00000364946 201 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 Y_RNA.372-201ENST00000365599 102 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 RNU6-741P-201ENST00000383889 107 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 OR51A5P-201ENST00000415429 942 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 AL353193.1-201ENST00000421444 268 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
APOBEC1P41238 TMEM167AP1-201ENST00000423409 219 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.12□□□□□ -1.91
APOBEC1P41238 UBE2D3P2-201ENST00000424409 445 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 ATP5JP1-201ENST00000431631 322 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.12□□□□□ -1.91
APOBEC1P41238 Z99127.3-201ENST00000448158 395 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.12□□□□□ -1.91
APOBEC1P41238 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.12□□□□□ -1.91
APOBEC1P41238 RNU7-182P-201ENST00000459009 62 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 RPL23AP14-201ENST00000468281 468 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 RPL30P5-201ENST00000494923 336 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.12□□□□□ -1.91
APOBEC1P41238 AC110768.1-201ENST00000509222 400 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 PCBP2P3-201ENST00000509726 843 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 FCF1P8-201ENST00000510322 597 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 AC108078.2-201ENST00000510750 236 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.12□□□□□ -1.91
APOBEC1P41238 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.12□□□□□ -1.91
APOBEC1P41238 OR5B10P-201ENST00000532869 642 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.12□□□□□ -1.91
APOBEC1P41238 AL512310.1-201ENST00000548639 172 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 AC027807.1-201ENST00000559921 996 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 HMGB1P33-201ENST00000563485 527 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.12□□□□□ -1.91
APOBEC1P41238 AC107304.1-201ENST00000604229 296 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 AP001330.5-201ENST00000607176 411 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.12□□□□□ -1.91
APOBEC1P41238 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.12□□□□□ -1.91
APOBEC1P41238 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
APOBEC1P41238 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.12□□□□□ -1.91
APOBEC1P41238 AC025034.2-201ENST00000623264 286 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 U6.114-201ENST00000636407 96 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
APOBEC1P41238 AC017071.1-201ENST00000564407 2204 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
APOBEC1P41238 AL513302.2-201ENST00000562313 1842 ntBASIC3.12□□□□□ -1.91
APOBEC1P41238 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
APOBEC1P41238 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms