Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 SNORD73A-201ENST00000386062 65 ntBASIC4.59□□□□□ -1.67
CCNFP41002 MIR298-201ENST00000401212 88 ntBASIC4.59□□□□□ -1.67
CCNFP41002 RNU4-6P-201ENST00000410804 122 ntBASIC4.59□□□□□ -1.67
CCNFP41002 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.59□□□□□ -1.67
CCNFP41002 GSTA11P-201ENST00000452866 669 ntBASIC4.59□□□□□ -1.67
CCNFP41002 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.59□□□□□ -1.67
CCNFP41002 RPS26P28-201ENST00000470806 348 ntBASIC4.59□□□□□ -1.67
CCNFP41002 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.59□□□□□ -1.67
CCNFP41002 RPL31P60-201ENST00000478450 367 ntBASIC4.59□□□□□ -1.67
CCNFP41002 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.59□□□□□ -1.67
CCNFP41002 RNU6-143P-201ENST00000516942 93 ntBASIC4.59□□□□□ -1.67
CCNFP41002 RNU6-264P-201ENST00000517134 104 ntBASIC4.59□□□□□ -1.67
CCNFP41002 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.59□□□□□ -1.67
CCNFP41002 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCNFP41002 AL139395.1-201ENST00000603662 160 ntBASIC4.59□□□□□ -1.67
CCNFP41002 SNORD39.4-201ENST00000620099 78 ntBASIC4.59□□□□□ -1.67
CCNFP41002 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCNFP41002 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCNFP41002 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
CCNFP41002 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCNFP41002 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCNFP41002 SDAD1P2-201ENST00000441308 2028 ntBASIC4.58□□□□□ -1.68
CCNFP41002 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.58□□□□□ -1.68
CCNFP41002 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCNFP41002 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNFP41002 AC125257.1-201ENST00000560400 2930 ntBASIC4.58□□□□□ -1.68
CCNFP41002 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCNFP41002 RNU6-490P-201ENST00000362985 107 ntBASIC4.58□□□□□ -1.68
CCNFP41002 RN7SKP103-201ENST00000363848 320 ntBASIC4.58□□□□□ -1.68
CCNFP41002 Y_RNA.252-201ENST00000364556 101 ntBASIC4.58□□□□□ -1.68
CCNFP41002 Y_RNA.428-201ENST00000384078 102 ntBASIC4.58□□□□□ -1.68
CCNFP41002 MIR517A-201ENST00000385001 87 ntBASIC4.58□□□□□ -1.68
CCNFP41002 MIR568-201ENST00000385036 95 ntBASIC4.58□□□□□ -1.68
CCNFP41002 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCNFP41002 TOMM22P1-201ENST00000418578 312 ntBASIC4.58□□□□□ -1.68
CCNFP41002 UBE2V1P4-201ENST00000425374 344 ntBASIC4.58□□□□□ -1.68
CCNFP41002 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNFP41002 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.58□□□□□ -1.68
CCNFP41002 AL360271.2-201ENST00000447710 161 ntBASIC4.58□□□□□ -1.68
CCNFP41002 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCNFP41002 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCNFP41002 ISCUP1-201ENST00000454451 448 ntBASIC4.58□□□□□ -1.68
CCNFP41002 RPL36AP41-201ENST00000493820 306 ntBASIC4.58□□□□□ -1.68
CCNFP41002 AC015911.1-201ENST00000495111 156 ntBASIC4.58□□□□□ -1.68
CCNFP41002 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.58□□□□□ -1.68
CCNFP41002 AC023442.1-201ENST00000531247 422 ntBASIC4.58□□□□□ -1.68
CCNFP41002 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.58□□□□□ -1.68
CCNFP41002 AC084783.1-201ENST00000565846 910 ntBASIC4.58□□□□□ -1.68
CCNFP41002 MIR3149-201ENST00000584629 83 ntBASIC4.58□□□□□ -1.68
CCNFP41002 OR1M4P-201ENST00000589199 287 ntBASIC4.58□□□□□ -1.68
CCNFP41002 MIR6853-201ENST00000619642 74 ntBASIC4.58□□□□□ -1.68
CCNFP41002 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.58□□□□□ -1.68
CCNFP41002 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCNFP41002 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCNFP41002 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
CCNFP41002 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.58□□□□□ -1.68
CCNFP41002 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CCNFP41002 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.57□□□□□ -1.68
CCNFP41002 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.57□□□□□ -1.68
CCNFP41002 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCNFP41002 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCNFP41002 RNU1-44P-201ENST00000384453 163 ntBASIC4.57□□□□□ -1.68
CCNFP41002 Y_RNA.557-201ENST00000384680 107 ntBASIC4.57□□□□□ -1.68
CCNFP41002 AL513331.1-201ENST00000411908 397 ntBASIC4.57□□□□□ -1.68
CCNFP41002 AC140479.3-201ENST00000418944 1126 ntBASIC4.57□□□□□ -1.68
CCNFP41002 RPS15AP6-201ENST00000420703 385 ntBASIC4.57□□□□□ -1.68
CCNFP41002 AC008267.5-201ENST00000424928 265 ntBASIC4.57□□□□□ -1.68
CCNFP41002 AC096644.2-201ENST00000429278 159 ntBASIC4.57□□□□□ -1.68
CCNFP41002 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.57□□□□□ -1.68
CCNFP41002 SNORD5.1-201ENST00000458800 75 ntBASIC4.57□□□□□ -1.68
CCNFP41002 AC078817.1-201ENST00000492623 435 ntBASIC4.57□□□□□ -1.68
CCNFP41002 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.57□□□□□ -1.68
CCNFP41002 AC007016.1-201ENST00000512110 244 ntBASIC4.57□□□□□ -1.68
CCNFP41002 RNA5SP471-201ENST00000516971 106 ntBASIC4.57□□□□□ -1.68
CCNFP41002 SNORD116.3-201ENST00000517176 78 ntBASIC4.57□□□□□ -1.68
CCNFP41002 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCNFP41002 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
CCNFP41002 AC007390.2-201ENST00000606229 3803 ntBASIC4.57□□□□□ -1.68
CCNFP41002 AC034102.8-201ENST00000615146 484 ntBASIC4.57□□□□□ -1.68
CCNFP41002 AC091953.3-201ENST00000623220 236 ntBASIC4.57□□□□□ -1.68
CCNFP41002 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCNFP41002 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.57□□□□□ -1.68
CCNFP41002 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCNFP41002 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCNFP41002 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCNFP41002 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.56□□□□□ -1.68
CCNFP41002 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.56□□□□□ -1.68
CCNFP41002 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCNFP41002 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CCNFP41002 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CCNFP41002 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCNFP41002 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCNFP41002 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CCNFP41002 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCNFP41002 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCNFP41002 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCNFP41002 DEFB108F-201ENST00000344638 222 ntBASIC4.56□□□□□ -1.68
CCNFP41002 SNORA7.2-201ENST00000364446 145 ntBASIC4.56□□□□□ -1.68
CCNFP41002 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCNFP41002 RNU1-63P-201ENST00000383902 164 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms