Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC024082.2-201ENST00000434771 238 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.01□□□□□ -1.77
COL11A2P13942 AC239809.1-201ENST00000450470 217 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.01□□□□□ -1.77
COL11A2P13942 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.01□□□□□ -1.77
COL11A2P13942 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.01□□□□□ -1.77
COL11A2P13942 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.01□□□□□ -1.77
COL11A2P13942 SNORA40.12-201ENST00000516329 111 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.01□□□□□ -1.77
COL11A2P13942 AP000907.2-201ENST00000530827 353 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.01□□□□□ -1.77
COL11A2P13942 BRDTP1-201ENST00000605735 677 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AC007390.2-201ENST00000606229 3803 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 uc_338.25-201ENST00000613756 156 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AC007998.5-201ENST00000622938 237 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 AC091953.2-201ENST00000623979 160 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 CYP3A51P-201ENST00000633513 256 ntBASIC4.01□□□□□ -1.77
COL11A2P13942 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.01□□□□□ -1.77
COL11A2P13942 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4□□□□□ -1.77
COL11A2P13942 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4□□□□□ -1.77
COL11A2P13942 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4□□□□□ -1.77
COL11A2P13942 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
COL11A2P13942 AC092447.10-201ENST00000620607 1652 ntBASIC4□□□□□ -1.77
COL11A2P13942 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL11A2P13942 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
COL11A2P13942 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL11A2P13942 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL11A2P13942 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL11A2P13942 AC073343.1-201ENST00000328239 651 ntBASIC4□□□□□ -1.77
COL11A2P13942 RNU6-283P-201ENST00000364788 107 ntBASIC4□□□□□ -1.77
COL11A2P13942 RNU6-444P-201ENST00000383988 108 ntBASIC4□□□□□ -1.77
COL11A2P13942 RPL5P18-201ENST00000406671 891 ntBASIC4□□□□□ -1.77
COL11A2P13942 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4□□□□□ -1.77
COL11A2P13942 EEF1A1P41-201ENST00000414667 207 ntBASIC4□□□□□ -1.77
COL11A2P13942 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4□□□□□ -1.77
COL11A2P13942 MTCO2P27-201ENST00000420740 428 ntBASIC4□□□□□ -1.77
COL11A2P13942 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL11A2P13942 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4□□□□□ -1.77
COL11A2P13942 Z82205.1-201ENST00000428456 297 ntBASIC4□□□□□ -1.77
COL11A2P13942 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4□□□□□ -1.77
COL11A2P13942 ERLEC1P1-201ENST00000433806 578 ntBASIC4□□□□□ -1.77
COL11A2P13942 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4□□□□□ -1.77
COL11A2P13942 IPO7P1-201ENST00000442031 636 ntBASIC4□□□□□ -1.77
COL11A2P13942 HSPE1P28-201ENST00000443139 211 ntBASIC4□□□□□ -1.77
COL11A2P13942 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4□□□□□ -1.77
COL11A2P13942 AC007547.1-201ENST00000462177 490 ntBASIC4□□□□□ -1.77
COL11A2P13942 AL163973.1-201ENST00000484753 577 ntBASIC4□□□□□ -1.77
COL11A2P13942 Y_RNA.691-201ENST00000516611 103 ntBASIC4□□□□□ -1.77
COL11A2P13942 RNU6-714P-201ENST00000516963 103 ntBASIC4□□□□□ -1.77
COL11A2P13942 RNU6-410P-201ENST00000517006 107 ntBASIC4□□□□□ -1.77
COL11A2P13942 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4□□□□□ -1.77
COL11A2P13942 GTF3AP2-201ENST00000557014 266 ntBASIC4□□□□□ -1.77
COL11A2P13942 AC026464.5-201ENST00000562497 722 ntBASIC4□□□□□ -1.77
COL11A2P13942 AC018552.3-201ENST00000567416 561 ntBASIC4□□□□□ -1.77
COL11A2P13942 MIR3146-201ENST00000580367 79 ntBASIC4□□□□□ -1.77
COL11A2P13942 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4□□□□□ -1.77
COL11A2P13942 AL627309.6-201ENST00000606857 840 ntBASIC4□□□□□ -1.77
COL11A2P13942 AL158196.1-201ENST00000616786 434 ntBASIC4□□□□□ -1.77
COL11A2P13942 AC009318.4-201ENST00000620496 486 ntBASIC4□□□□□ -1.77
COL11A2P13942 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4□□□□□ -1.77
COL11A2P13942 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
COL11A2P13942 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
COL11A2P13942 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
COL11A2P13942 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL11A2P13942 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL11A2P13942 AC018555.1-201ENST00000567548 1980 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 MTND5P33-201ENST00000571250 1450 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 AC073325.2-201ENST00000339545 159 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 MIR448-201ENST00000362131 111 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 Y_RNA.197-201ENST00000364004 102 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 Y_RNA.301-201ENST00000364990 103 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 RNU6-606P-201ENST00000384721 111 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 AL591416.1-201ENST00000404015 867 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.99□□□□□ -1.77
COL11A2P13942 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.99□□□□□ -1.77
COL11A2P13942 RPL23AP74-201ENST00000437246 471 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.99□□□□□ -1.77
COL11A2P13942 HIGD1AP3-201ENST00000515857 278 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 RNU6-1314P-201ENST00000517139 104 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 SCARNA20.6-201ENST00000517251 106 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.99□□□□□ -1.77
COL11A2P13942 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.99□□□□□ -1.77
COL11A2P13942 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.99□□□□□ -1.77
COL11A2P13942 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL11A2P13942 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.99□□□□□ -1.77
COL11A2P13942 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.99□□□□□ -1.77
COL11A2P13942 MAGOH2P-202ENST00000584384 429 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 POLR3GP2-201ENST00000588366 668 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.99□□□□□ -1.77
COL11A2P13942 AC124303.1-201ENST00000605703 360 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 AC084781.2-201ENST00000615568 161 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 AC092125.1-201ENST00000562568 1995 ntBASIC3.99□□□□□ -1.77
COL11A2P13942 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL11A2P13942 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL11A2P13942 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.99□□□□□ -1.77
COL11A2P13942 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
COL11A2P13942 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL11A2P13942 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL11A2P13942 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms