Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 DYNLL1P4-201ENST00000549314 266 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 AL121576.1-201ENST00000556055 276 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 RNA5SP108-201ENST00000605921 117 ntBASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CSB-PGBD3P0DP91 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 Y_RNA.222-201ENST00000364264 102 ntBASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 Y_RNA.380-201ENST00000365663 111 ntBASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 RNU2-23P-201ENST00000410545 195 ntBASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 MTND5P15-201ENST00000434246 349 ntBASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 HIGD1AP11-201ENST00000438361 280 ntBASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 AL353752.1-201ENST00000454946 260 ntBASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 AC112492.4-201ENST00000456549 352 ntBASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 RNA5SP497-201ENST00000516081 97 ntBASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 AC008489.1-201ENST00000524271 483 ntBASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 AP006587.4-201ENST00000526053 529 ntBASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 MIR3158-1-201ENST00000583596 81 ntBASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 AL670379.4-201ENST00000605279 254 ntBASIC5.9□□□□□ -1.46
CSB-PGBD3P0DP91 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CSB-PGBD3P0DP91 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.9□□□□□ -1.47
CSB-PGBD3P0DP91 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CSB-PGBD3P0DP91 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CSB-PGBD3P0DP91 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CSB-PGBD3P0DP91 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CSB-PGBD3P0DP91 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 Y_RNA.477-201ENST00000384352 108 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 Y_RNA.483-201ENST00000384380 101 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-1127P-201ENST00000384580 107 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 MIR3065-201ENST00000390137 79 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 RNU2-38P-201ENST00000410856 79 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 BX682237.1-201ENST00000415016 335 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 RPL7P37-201ENST00000425095 738 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 RPL21P91-201ENST00000429231 479 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-475P-201ENST00000516073 104 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 RNA5SP249-201ENST00000516127 99 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-840P-201ENST00000517275 65 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 RPL23AP84-201ENST00000571193 464 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 MIR5692C1-201ENST00000585309 91 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 AC079587.1-201ENST00000603846 277 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 AL158032.1-201ENST00000605401 106 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 MIR6867-201ENST00000610636 67 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 SDR42E1P2-201ENST00000614861 481 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 AL353748.2-201ENST00000622148 471 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 AL606534.2-204ENST00000635008 178 ntBASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
CSB-PGBD3P0DP91 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 AC074029.4-201ENST00000624796 1859 ntBASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-713P-201ENST00000384761 107 ntBASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 AC009237.10-201ENST00000414112 510 ntBASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 MRPS18CP6-201ENST00000423587 223 ntBASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 NEFMP1-201ENST00000443423 1006 ntBASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 AL590664.1-201ENST00000448065 339 ntBASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 AL162151.2-201ENST00000448875 158 ntBASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 DYNLL1P5-201ENST00000467158 270 ntBASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 AC114801.2-201ENST00000503825 781 ntBASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 RNU6-138P-201ENST00000515952 107 ntBASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 RNU1-54P-201ENST00000517181 120 ntBASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 AL138889.2-201ENST00000603883 242 ntBASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CSB-PGBD3P0DP91 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms