Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 AC128657.1-201ENST00000549459 145 ntBASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 AC002400.1-201ENST00000569310 726 ntBASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 AC010620.2-201ENST00000600135 313 ntBASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 AL035413.2-201ENST00000604801 525 ntBASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 MTND4LP5-201ENST00000605152 292 ntBASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 AC245517.5-201ENST00000611529 162 ntBASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 AC090970.3-201ENST00000612566 866 ntBASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 AC079395.3-201ENST00000615161 484 ntBASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 UCA1.1-201ENST00000620952 75 ntBASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
IGHV3-43DP0DP04 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 Y_RNA.46-201ENST00000362695 102 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 Y_RNA.97-201ENST00000363094 102 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 RNU6-884P-201ENST00000363889 107 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 Y_RNA.245-201ENST00000364493 95 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 USP9YP20-201ENST00000419224 558 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 RPS27AP14-201ENST00000422868 454 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 GTF2IP20-201ENST00000431663 360 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AC109583.1-201ENST00000432156 268 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 FCF1P1-201ENST00000432690 571 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 RPL36AP6-201ENST00000435770 321 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AC105272.1-201ENST00000438604 198 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AC009296.1-201ENST00000443146 155 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 Z96811.1-201ENST00000445880 108 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 WASF1P1-201ENST00000447560 1131 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 RPL26P9-201ENST00000457466 433 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 SRIP1-201ENST00000489235 288 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 RNU6-56P-201ENST00000516986 93 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 RN7SKP258-201ENST00000517151 304 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 SNORA31.26-201ENST00000517250 137 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AL356432.3-201ENST00000568952 465 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 MIR4293-201ENST00000584305 78 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AL355877.2-201ENST00000603670 358 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 BX664608.1-201ENST00000610519 487 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AC008498.1-201ENST00000613012 531 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AC006386.2-201ENST00000624491 75 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AC012005.1-201ENST00000624575 75 ntBASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.16□□□□□ -2.06
IGHV3-43DP0DP04 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
IGHV3-43DP0DP04 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 RNU6-1167P-201ENST00000363227 94 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 SNORA9-201ENST00000384215 133 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 RNU6-809P-201ENST00000384461 107 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 MIR592-201ENST00000384959 97 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 MIR888-201ENST00000401186 77 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AL513477.1-202ENST00000417061 214 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC104332.2-201ENST00000429959 156 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 RPL37P21-201ENST00000435890 276 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 TIMM9P1-201ENST00000436122 256 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 MTCYBP39-201ENST00000437562 491 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 ST13P20-201ENST00000447996 1065 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 RPL37P6-201ENST00000460682 294 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 MRPS17P3-201ENST00000465453 385 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 RPL36AP51-201ENST00000487216 318 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 RN7SKP132-201ENST00000516001 208 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 RN7SKP287-201ENST00000516546 266 ntBASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.15□□□□□ -2.07
IGHV3-43DP0DP04 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms