Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AP001596.2-201ENST00000608410 312 ntBASIC3.56□□□□□ -1.84
MMP3P08254 uc_338.25-201ENST00000613756 156 ntBASIC3.56□□□□□ -1.84
MMP3P08254 AC019226.1-201ENST00000625666 515 ntBASIC3.56□□□□□ -1.84
MMP3P08254 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.56□□□□□ -1.84
MMP3P08254 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
MMP3P08254 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MMP3P08254 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.56□□□□□ -1.84
MMP3P08254 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.55□□□□□ -1.84
MMP3P08254 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
MMP3P08254 RNU6-1103P-201ENST00000384150 107 ntBASIC3.55□□□□□ -1.84
MMP3P08254 RNU6-278P-201ENST00000390945 109 ntBASIC3.55□□□□□ -1.84
MMP3P08254 RNU2-9P-201ENST00000410194 145 ntBASIC3.55□□□□□ -1.84
MMP3P08254 RNU2-43P-201ENST00000410306 190 ntBASIC3.55□□□□□ -1.84
MMP3P08254 RPL35AP12-201ENST00000425362 338 ntBASIC3.55□□□□□ -1.84
MMP3P08254 USP9YP18-201ENST00000425912 695 ntBASIC3.55□□□□□ -1.84
MMP3P08254 DPPA2P1-201ENST00000428060 556 ntBASIC3.55□□□□□ -1.84
MMP3P08254 MTND3P21-201ENST00000433774 331 ntBASIC3.55□□□□□ -1.84
MMP3P08254 AC004866.2-201ENST00000438285 481 ntBASIC3.55□□□□□ -1.84
MMP3P08254 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.55□□□□□ -1.84
MMP3P08254 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.55□□□□□ -1.84
MMP3P08254 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.55□□□□□ -1.84
MMP3P08254 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.55□□□□□ -1.84
MMP3P08254 MTND1P9-201ENST00000453775 944 ntBASIC3.55□□□□□ -1.84
MMP3P08254 AC010285.1-201ENST00000470580 392 ntBASIC3.55□□□□□ -1.84
MMP3P08254 AC078785.3-201ENST00000476607 425 ntBASIC3.55□□□□□ -1.84
MMP3P08254 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.55□□□□□ -1.84
MMP3P08254 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.55□□□□□ -1.84
MMP3P08254 AC234778.2-201ENST00000566241 354 ntBASIC3.55□□□□□ -1.84
MMP3P08254 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.55□□□□□ -1.84
MMP3P08254 AC090616.5-202ENST00000582111 297 ntBASIC3.55□□□□□ -1.84
MMP3P08254 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.55□□□□□ -1.84
MMP3P08254 AL022099.1-201ENST00000604551 712 ntBASIC3.55□□□□□ -1.84
MMP3P08254 AL033523.1-201ENST00000605153 153 ntBASIC3.55□□□□□ -1.84
MMP3P08254 AL034351.1-201ENST00000605288 668 ntBASIC3.55□□□□□ -1.84
MMP3P08254 AC007014.2-201ENST00000615581 479 ntBASIC3.55□□□□□ -1.84
MMP3P08254 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
MMP3P08254 AC073534.2-201ENST00000620377 381 ntBASIC3.55□□□□□ -1.84
MMP3P08254 AC139792.3-201ENST00000623525 224 ntBASIC3.55□□□□□ -1.84
MMP3P08254 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.55□□□□□ -1.84
MMP3P08254 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MMP3P08254 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
MMP3P08254 FAM35DP-201ENST00000323387 2712 ntBASIC3.55□□□□□ -1.84
MMP3P08254 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.55□□□□□ -1.84
MMP3P08254 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MMP3P08254 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MMP3P08254 GABPAP-201ENST00000419271 1356 ntBASIC3.54□□□□□ -1.84
MMP3P08254 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.54□□□□□ -1.84
MMP3P08254 SNORD56.2-201ENST00000363242 71 ntBASIC3.54□□□□□ -1.84
MMP3P08254 RNY1P12-201ENST00000364251 105 ntBASIC3.54□□□□□ -1.84
MMP3P08254 RNU6-335P-201ENST00000364563 113 ntBASIC3.54□□□□□ -1.84
MMP3P08254 RNU6-7-201ENST00000364784 107 ntBASIC3.54□□□□□ -1.84
MMP3P08254 RNU6-1283P-201ENST00000365314 105 ntBASIC3.54□□□□□ -1.84
MMP3P08254 RNU6-8-201ENST00000365467 107 ntBASIC3.54□□□□□ -1.84
MMP3P08254 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.54□□□□□ -1.84
MMP3P08254 SNORA54-201ENST00000384281 123 ntBASIC3.54□□□□□ -1.84
MMP3P08254 MIR1-2-201ENST00000384961 85 ntBASIC3.54□□□□□ -1.84
MMP3P08254 RNU2-36P-201ENST00000410361 191 ntBASIC3.54□□□□□ -1.84
MMP3P08254 RNU2-37P-201ENST00000410695 177 ntBASIC3.54□□□□□ -1.84
MMP3P08254 MTCO3P12-201ENST00000416718 547 ntBASIC3.54□□□□□ -1.84
MMP3P08254 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.54□□□□□ -1.84
MMP3P08254 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.54□□□□□ -1.84
MMP3P08254 AC093106.2-201ENST00000428212 385 ntBASIC3.54□□□□□ -1.84
MMP3P08254 AL662791.1-201ENST00000441992 928 ntBASIC3.54□□□□□ -1.84
MMP3P08254 HMGN2P21-201ENST00000447764 270 ntBASIC3.54□□□□□ -1.84
MMP3P08254 AC140076.1-201ENST00000449897 361 ntBASIC3.54□□□□□ -1.84
MMP3P08254 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.54□□□□□ -1.84
MMP3P08254 AC078817.1-201ENST00000492623 435 ntBASIC3.54□□□□□ -1.84
MMP3P08254 AC023194.1-201ENST00000493084 308 ntBASIC3.54□□□□□ -1.84
MMP3P08254 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.54□□□□□ -1.84
MMP3P08254 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.54□□□□□ -1.84
MMP3P08254 RNU2-58P-201ENST00000516403 183 ntBASIC3.54□□□□□ -1.84
MMP3P08254 MIR2276-201ENST00000516886 89 ntBASIC3.54□□□□□ -1.84
MMP3P08254 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.54□□□□□ -1.84
MMP3P08254 AC090572.1-201ENST00000519251 160 ntBASIC3.54□□□□□ -1.84
MMP3P08254 AC103783.1-201ENST00000520506 373 ntBASIC3.54□□□□□ -1.84
MMP3P08254 MTCYBP41-201ENST00000528913 1123 ntBASIC3.54□□□□□ -1.84
MMP3P08254 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.54□□□□□ -1.84
MMP3P08254 GLUD1P4-201ENST00000590914 418 ntBASIC3.54□□□□□ -1.84
MMP3P08254 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.54□□□□□ -1.84
MMP3P08254 AC008277.2-201ENST00000605196 797 ntBASIC3.54□□□□□ -1.84
MMP3P08254 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MMP3P08254 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.54□□□□□ -1.84
MMP3P08254 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MMP3P08254 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.53□□□□□ -1.84
MMP3P08254 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
MMP3P08254 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MMP3P08254 RNU1-39P-201ENST00000383897 165 ntBASIC3.53□□□□□ -1.84
MMP3P08254 Y_RNA.450-201ENST00000384198 113 ntBASIC3.53□□□□□ -1.84
MMP3P08254 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
MMP3P08254 RNU6-882P-201ENST00000391025 103 ntBASIC3.53□□□□□ -1.84
MMP3P08254 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MMP3P08254 Z98941.1-201ENST00000407764 100 ntBASIC3.53□□□□□ -1.84
MMP3P08254 RNU4-65P-201ENST00000410473 140 ntBASIC3.53□□□□□ -1.84
MMP3P08254 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.53□□□□□ -1.84
MMP3P08254 AC005094.1-201ENST00000440420 368 ntBASIC3.53□□□□□ -1.84
MMP3P08254 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.53□□□□□ -1.84
MMP3P08254 AC025750.2-201ENST00000442609 450 ntBASIC3.53□□□□□ -1.84
MMP3P08254 SNRPGP6-201ENST00000451124 220 ntBASIC3.53□□□□□ -1.84
MMP3P08254 AL136097.1-201ENST00000456945 913 ntBASIC3.53□□□□□ -1.84
MMP3P08254 MTCO2P29-201ENST00000465212 189 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms