Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC135178.6-201ENST00000605314 398 ntBASIC0.54□□□□□ -2.32
APOBP04114 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.54□□□□□ -2.32
APOBP04114 AC008669.1-201ENST00000565823 2178 ntBASIC0.54□□□□□ -2.32
APOBP04114 SNORD114-2-201ENST00000363953 78 ntBASIC0.54□□□□□ -2.32
APOBP04114 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.54□□□□□ -2.32
APOBP04114 RNA5SP127-201ENST00000411051 133 ntBASIC0.54□□□□□ -2.32
APOBP04114 AC092447.6-201ENST00000414578 210 ntBASIC0.54□□□□□ -2.32
APOBP04114 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.54□□□□□ -2.32
APOBP04114 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.54□□□□□ -2.32
APOBP04114 AC005410.1-202ENST00000460347 485 ntBASIC0.54□□□□□ -2.32
APOBP04114 MRPS17P9-201ENST00000511924 393 ntBASIC0.54□□□□□ -2.32
APOBP04114 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.54□□□□□ -2.32
APOBP04114 RNU6-970P-201ENST00000516312 107 ntBASIC0.54□□□□□ -2.32
APOBP04114 SNORA31.25-201ENST00000517242 134 ntBASIC0.54□□□□□ -2.32
APOBP04114 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC0.54□□□□□ -2.32
APOBP04114 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.53□□□□□ -2.32
APOBP04114 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
APOBP04114 AC007342.9-201ENST00000623877 1385 ntBASIC0.53□□□□□ -2.32
APOBP04114 AL360221.1-201ENST00000445989 335 ntBASIC0.53□□□□□ -2.32
APOBP04114 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.53□□□□□ -2.32
APOBP04114 GAS5-AS1-201ENST00000602767 694 ntBASIC0.53□□□□□ -2.32
APOBP04114 RNU2-71P-201ENST00000411395 189 ntBASIC0.53□□□□□ -2.32
APOBP04114 AC092745.2-202ENST00000411880 369 ntBASIC0.53□□□□□ -2.32
APOBP04114 SNRPEP4-201ENST00000435815 279 ntBASIC0.53□□□□□ -2.32
APOBP04114 AC091965.2-201ENST00000512324 613 ntBASIC0.53□□□□□ -2.32
APOBP04114 CYCSP23-201ENST00000519781 313 ntBASIC0.53□□□□□ -2.32
APOBP04114 AC022662.1-201ENST00000580252 331 ntBASIC0.53□□□□□ -2.32
APOBP04114 AC090953.1-201ENST00000604305 1092 ntBASIC0.53□□□□□ -2.32
APOBP04114 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.53□□□□□ -2.32
APOBP04114 MIR6086-201ENST00000638065 55 ntBASIC0.53□□□□□ -2.32
APOBP04114 RNU2-70P-201ENST00000410718 179 ntBASIC0.53□□□□□ -2.33
APOBP04114 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.53□□□□□ -2.33
APOBP04114 SNORD97-201ENST00000459187 142 ntBASIC0.53□□□□□ -2.33
APOBP04114 AK3P2-201ENST00000507976 429 ntBASIC0.53□□□□□ -2.33
APOBP04114 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.53□□□□□ -2.33
APOBP04114 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.53□□□□□ -2.33
APOBP04114 RNA5SP276-201ENST00000362580 94 ntBASIC0.52□□□□□ -2.33
APOBP04114 Y_RNA.48-201ENST00000362710 103 ntBASIC0.52□□□□□ -2.33
APOBP04114 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.52□□□□□ -2.33
APOBP04114 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.52□□□□□ -2.33
APOBP04114 RNU11-2P-201ENST00000516898 142 ntBASIC0.52□□□□□ -2.33
APOBP04114 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.52□□□□□ -2.33
APOBP04114 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.52□□□□□ -2.33
APOBP04114 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.52□□□□□ -2.33
APOBP04114 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.52□□□□□ -2.33
APOBP04114 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.52□□□□□ -2.33
APOBP04114 AC108706.1-201ENST00000611053 297 ntBASIC0.52□□□□□ -2.33
APOBP04114 AC007742.2-201ENST00000618226 398 ntBASIC0.52□□□□□ -2.33
APOBP04114 MIR6835-201ENST00000621552 64 ntBASIC0.52□□□□□ -2.33
APOBP04114 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.52□□□□□ -2.33
APOBP04114 RNU6-50P-201ENST00000362356 103 ntBASIC0.52□□□□□ -2.33
APOBP04114 SNORA23-201ENST00000365128 182 ntBASIC0.52□□□□□ -2.33
APOBP04114 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.52□□□□□ -2.33
APOBP04114 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.52□□□□□ -2.33
APOBP04114 RPL21P103-201ENST00000479921 488 ntBASIC0.52□□□□□ -2.33
APOBP04114 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.52□□□□□ -2.33
APOBP04114 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.52□□□□□ -2.33
APOBP04114 AC087465.1-201ENST00000560574 245 ntBASIC0.52□□□□□ -2.33
APOBP04114 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.52□□□□□ -2.33
APOBP04114 AL139397.2-201ENST00000404529 772 ntBASIC0.52□□□□□ -2.33
APOBP04114 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.52□□□□□ -2.33
APOBP04114 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.52□□□□□ -2.33
APOBP04114 UBBP3-201ENST00000445497 241 ntBASIC0.52□□□□□ -2.33
APOBP04114 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
APOBP04114 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.52□□□□□ -2.33
APOBP04114 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.52□□□□□ -2.33
APOBP04114 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.52□□□□□ -2.33
APOBP04114 RNU4-77P-201ENST00000516692 156 ntBASIC0.52□□□□□ -2.33
APOBP04114 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.52□□□□□ -2.33
APOBP04114 AC123786.2-201ENST00000603459 275 ntBASIC0.52□□□□□ -2.33
APOBP04114 AL162373.1-201ENST00000620433 407 ntBASIC0.52□□□□□ -2.33
APOBP04114 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.52□□□□□ -2.33
APOBP04114 MIR26B-201ENST00000362251 77 ntBASIC0.52□□□□□ -2.33
APOBP04114 ZNF965P-201ENST00000432501 817 ntBASIC0.52□□□□□ -2.33
APOBP04114 AC104806.1-201ENST00000508720 308 ntBASIC0.52□□□□□ -2.33
APOBP04114 CYCSP26-201ENST00000534107 320 ntBASIC0.52□□□□□ -2.33
APOBP04114 APOOP3-201ENST00000536787 586 ntBASIC0.52□□□□□ -2.33
APOBP04114 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.52□□□□□ -2.33
APOBP04114 SNRPGP15-201ENST00000600149 222 ntBASIC0.52□□□□□ -2.33
APOBP04114 AC010200.2-201ENST00000605098 235 ntBASIC0.52□□□□□ -2.33
APOBP04114 AC091304.6-201ENST00000619761 202 ntBASIC0.52□□□□□ -2.33
APOBP04114 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
APOBP04114 SNRPFP2-201ENST00000440710 251 ntBASIC0.51□□□□□ -2.33
APOBP04114 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.51□□□□□ -2.33
APOBP04114 AL136363.1-201ENST00000605349 337 ntBASIC0.51□□□□□ -2.33
APOBP04114 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.51□□□□□ -2.33
APOBP04114 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.51□□□□□ -2.33
APOBP04114 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.51□□□□□ -2.33
APOBP04114 AL591034.1-201ENST00000407447 340 ntBASIC0.51□□□□□ -2.33
APOBP04114 SNORD23.1-201ENST00000408212 104 ntBASIC0.51□□□□□ -2.33
APOBP04114 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
APOBP04114 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.51□□□□□ -2.33
APOBP04114 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.51□□□□□ -2.33
APOBP04114 MIR4723-201ENST00000585070 81 ntBASIC0.51□□□□□ -2.33
APOBP04114 RNU6-35P-201ENST00000384530 107 ntBASIC0.51□□□□□ -2.33
APOBP04114 RPL27AP8-201ENST00000424277 446 ntBASIC0.51□□□□□ -2.33
APOBP04114 AC087045.1-201ENST00000605856 382 ntBASIC0.51□□□□□ -2.33
APOBP04114 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.51□□□□□ -2.33
APOBP04114 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
APOBP04114 CST2P1-201ENST00000425770 87 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms